Lactobacillus plantarum CACC 558 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus plantarum CACC 558 RM systems
Ref: Kim,J.-A. et al. unpublished
REBASE ref # 29750
| Sequence length: | GenBank #: | |
| Chromosome: | 3,250,114 bp | CP048022 |
| plasmid p2CACC558: | 45,493 bp | CP048024 |
REBASE acronym: Lpl558
Org_num: 38018
All begin GWD03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | M1 family metallopeptidase | |||
| ??? | R | LplW2ORF3685P (99% identity) | Lpl558ORF1820P | |
| 1820 | M | M.LplZX028ORF4070P (100% identity) | M.Lpl558ORF1820P | |
| 1825 | S | S1.LplLQ80II (100% identity) | GRTANNNNNNRTTC | S1.Lpl558ORF1820P |
| 1830 | site-specific integrase | |||
| 1835 | S | S2.LplLQ80II (100% identity) | S2.Lpl558ORF1820P | |
| 1840 | S | S3.LplLQ80II (99% identity) | S3.Lpl558ORF1820P | |
| 1845 | histidine phosphatase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p2CACC558 | ||||
| 15760 | IS5 family transposase | |||
| 15765 | R | LplRI113ORFAP (100% identity) | TTCGAA | Lpl558IP |
| 15770 | M | M.Lpl195ORF15540P (100% identity) | TTCGAA | M.Lpl558I |
| 15775 | IS30 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5735 | LysR family transcriptional regulator | |||
| 5740 | R | Lpr5300MrrP (100% identity) | Lpl558MrrP | |
| 5745 | NAD(P)-binding domain-containing protein | |||