Ref: Hassan,H.M. et al. unpublished

REBASE ref # 29828

Sequence length:GenBank #:
Chromosome: 2,145,933 bp CP047142
plasmid unnamed: 179,151 bp CP047143

REBASE acronym: LspC25

Org_num: 38188

 

All begin GSR61_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
3010 N-6 DNA methylase
3015 R LcrC25ORF2755P (100% identity) LspC25ORF3020P
3020 M M.LcrC25ORF2755P (100% identity) M.LspC25ORF3020P
3025 S S.LcrC25ORF2755P (100% identity) S.LspC25ORF3020P
3030 78 aa hypothetical protein
 
5365 Mrr restriction system protein
5370 S S1.LcrDC211ORF5580P (46% identity) S3.LspC25ORF5395P
5375 IS30 family transposase
5380 S S1.LcrC25ORF11475P (100% identity) S2.LspC25ORF5395P
5385 tyrosine-type recombinase/integrase
5390 S S2.LcrC25ORF11475P (100% identity) S1.LspC25ORF5395P
5395 M M.LcrC25ORF11475P (100% identity) M.LspC25ORF5395P
??? R LcrC25ORF8200P (58% identity) LspC25ORF5395P
5415 CPBP family intramembrane metalloprotease
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
135 223 aa hypothetical protein
140 RM LcrC25ORF10145P (100% identity) LspC25ORF140P
145 242 aa hypothetical protein
 
1875 190 aa hypothetical protein
1880 RM LcrC25ORF4630P (100% identity) LspC25ORF1880P
1885 DUF4145 domain-containing protein
 
3565 BREX system P-loop protein BrxC
3570 RM LcrC25ORF2215P (94% identity) LspC25ORF3570P
3575 138 aa hypothetical protein
 
plasmid unnamed
 
11035 105 aa hypothetical protein
11040 M M.LcrC25ORF560P (100% identity) M.LspC25ORF11040P
11045 144 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
4695 ATPase
4700 C C.LcrC25ORF8325P (100% identity) C.LspC25ORF4705P
4705 M M.LcrC25ORF8325P (100% identity) M.LspC25ORF4705P
4710 R LcrC25ORF8325P (100% identity) LspC25ORF4705P
4715 430 aa hypothetical protein
 
plasmid unnamed
 
11010 250 aa hypothetical protein
11015 M M.LcrC25ORF585P (100% identity) M.LspC25ORF11015P
11020 R LcrC25ORF585P (100% identity) LspC25ORF11015P
11025 167 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
400 amino acid permease
405 R LcrC25ORF10730P (100% identity) LspC25ORF405P
410 serine hydrolase
 
5360 DUF3883 domain-containing protein
5365 R Lcr1DMrrP (100% identity) LspC25MrrP
5370 198 aa hypothetical protein