Lactobacillus species C25 |
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Putative Lactobacillus species C25 RM systems
Ref: Hassan,H.M. et al. unpublished
REBASE ref # 29828
| Sequence length: | GenBank #: | |
| Chromosome: | 2,145,933 bp | CP047142 |
| plasmid unnamed: | 179,151 bp | CP047143 |
REBASE acronym: LspC25
Org_num: 38188
All begin GSR61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3010 | N-6 DNA methylase | |||
| 3015 | R | LcrC25ORF2755P (100% identity) | LspC25ORF3020P | |
| 3020 | M | M.LcrC25ORF2755P (100% identity) | M.LspC25ORF3020P | |
| 3025 | S | S.LcrC25ORF2755P (100% identity) | S.LspC25ORF3020P | |
| 3030 | 78 aa hypothetical protein | |||
| 5365 | Mrr restriction system protein | |||
| 5370 | S | S1.LcrDC211ORF5580P (46% identity) | S3.LspC25ORF5395P | |
| 5375 | IS30 family transposase | |||
| 5380 | S | S1.LcrC25ORF11475P (100% identity) | S2.LspC25ORF5395P | |
| 5385 | tyrosine-type recombinase/integrase | |||
| 5390 | S | S2.LcrC25ORF11475P (100% identity) | S1.LspC25ORF5395P | |
| 5395 | M | M.LcrC25ORF11475P (100% identity) | M.LspC25ORF5395P | |
| ??? | R | LcrC25ORF8200P (58% identity) | LspC25ORF5395P | |
| 5415 | CPBP family intramembrane metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 135 | 223 aa hypothetical protein | |||
| 140 | RM | LcrC25ORF10145P (100% identity) | LspC25ORF140P | |
| 145 | 242 aa hypothetical protein | |||
| 1875 | 190 aa hypothetical protein | |||
| 1880 | RM | LcrC25ORF4630P (100% identity) | LspC25ORF1880P | |
| 1885 | DUF4145 domain-containing protein | |||
| 3565 | BREX system P-loop protein BrxC | |||
| 3570 | RM | LcrC25ORF2215P (94% identity) | LspC25ORF3570P | |
| 3575 | 138 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 11035 | 105 aa hypothetical protein | |||
| 11040 | M | M.LcrC25ORF560P (100% identity) | M.LspC25ORF11040P | |
| 11045 | 144 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4695 | ATPase | |||
| 4700 | C | C.LcrC25ORF8325P (100% identity) | C.LspC25ORF4705P | |
| 4705 | M | M.LcrC25ORF8325P (100% identity) | M.LspC25ORF4705P | |
| 4710 | R | LcrC25ORF8325P (100% identity) | LspC25ORF4705P | |
| 4715 | 430 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 11010 | 250 aa hypothetical protein | |||
| 11015 | M | M.LcrC25ORF585P (100% identity) | M.LspC25ORF11015P | |
| 11020 | R | LcrC25ORF585P (100% identity) | LspC25ORF11015P | |
| 11025 | 167 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 400 | amino acid permease | |||
| 405 | R | LcrC25ORF10730P (100% identity) | LspC25ORF405P | |
| 410 | serine hydrolase | |||
| 5360 | DUF3883 domain-containing protein | |||
| 5365 | R | Lcr1DMrrP (100% identity) | LspC25MrrP | |
| 5370 | 198 aa hypothetical protein | |||