Pectobacterium parmentieri HC |
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Putative Pectobacterium parmentieri HC RM systems
Ref: Jee,S. unpublished
REBASE ref # 29923
Complete sequence: 5,208,618 bp
GenBank #: CP046376
REBASE acronym: PpaHC
Org_num: 38475
All begin GMW39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1010 | WYL domain-containing protein | |||
| 1015 | M | M.SspW3ORF1087P (100% identity) | M.PpaHCORF1015P | |
| 1020 | S | S.SspW3ORF1087P (55% identity) | S.PpaHCORF1015P | |
| 1025 | helix-turn-helix domain-containing protein | |||
| 16595 | hydroxyacid dehydrogenase | |||
| 16600 | R | ParQJ311ORF2065P (98% identity) | PpaHCORF16610P | |
| 16605 | S | S.Spl13ORF1580P (57% identity) | S.PpaHCORF16610P | |
| 16610 | M | M.Psp3193ORF473P (98% identity) | M.PpaHCORF16610P | |
| 16615 | DUF4102 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 720 | 144 aa hypothetical protein | |||
| 725 | M | M.ParAK049ORF8485P (81% identity) | M.PpaHCORF725P | |
| 730 | 140 aa hypothetical protein | |||
| 9960 | molybdopterin-guanine dinucleotide biosynthesis | |||
| 9965 | M | M.Dsp1600ORFDP (78% identity) | M.PpaHCORF9965P | |
| 9970 | TIGR02646 family protein | |||
| 10110 | transcriptional regulator | |||
| 10115 | R | LposN51ORFAP (82% identity) | PpaHCORF10125P | |
| 10120 | 357 aa hypothetical protein | |||
| ??? | M | M.LpoN51ORF11425P (86% identity) | M.PpaHCORF10125P | |
| 10130 | V | V.LposN51ORFBP (82% identity) | V.PpaHCORF10125P | |
| 10135 | AAA family ATPase | |||
| 10575 | 73 aa hypothetical protein | |||
| 10580 | M | M.Ppa5441ORF8345P (100% identity) | M.PpaHCORF10580P | |
| 10585 | 86 aa hypothetical protein | |||
| 12260 | 114 aa hypothetical protein | |||
| 12265 | M | M.PspA5351ORF11590P (96% identity) | M.PpaHCORF12265P | |
| 12270 | 93 aa hypothetical protein | |||
| 14690 | DUF1176 domain-containing protein | |||
| 14695 | R | Pwa1AORF14510P (100% identity) | PpaHCORF14695P | |
| 14700 | XRE family transcriptional regulator | |||
| 21815 | SPOR domain-containing protein | |||
| 21820 | M | M.PwaDamP (100% identity) | GATC | M.PpaHCDamP |
| 21825 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16415 | 64 aa hypothetical protein | |||
| 16420 | R | Pca5702McrCP (88% identity) | PpaHCMcrCP | |
| 16425 | R | PcaWPP14McrBP (89% identity) | PpaHCMcrBP | |
| 16430 | 111 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10215 | 3-5 exoribonuclease | |||
| 10220 | M | M.Pat21AORF19320P (89% identity) | M.PpaHCORF10220P | |
| 10225 | replication endonuclease | |||