Escherichia coli 2EC1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 2EC1 RM systems
Ref: Ding,Y. and Seedorf,H. unpublished
REBASE ref # 29688
| Sequence length: | GenBank #: | |
| Chromosome: | 4,561,168 bp | CP047571 |
| plasmid p2EC1-1: | 127,645 bp | CP047572 |
REBASE acronym: Eco2EC1
Org_num: 37688
All begin GTQ78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8815 | 388 aa hypothetical protein | |||
| 8820 | M | M.EcoSHP24ORF10835P (100% identity) | M.Eco2EC1ORF8820P | |
| 8825 | S | S1.Eco31E3C03ORF9520P (100% identity) | S.Eco2EC1ORF8820P | |
| 8830 | UPF0149 family protein | |||
| 8835 | cold shock domain-containing protein | |||
| 8840 | R | Eco31E3C03ORF9520P (100% identity) | Eco2EC1ORF8820P | |
| 8845 | DUF45 domain-containing protein | |||
| 19030 | serine/threonine protein kinase | |||
| 19035 | M | M.Cfr4128ORF400P (99% identity) | M.Eco2EC1ORF19035P | |
| 19040 | S | S.EcoS081ORF10970P (61% identity) | S.Eco2EC1ORF19035P | |
| 19045 | DUF4268 domain-containing protein | |||
| 19050 | R | EcoNW114ORF20615P (100% identity) | Eco2EC1ORF19035P | |
| 19055 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | cell division protein DamX | |||
| 1795 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2EC1DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2405 | IS3-like element ISEc52 family transposase | |||
| 2410 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco2EC1ORF2410P |
| 2415 | DNA-binding transcriptional regulator Fis | |||
| 8495 | phosphohydrolase | |||
| 8500 | M | M.SflN116DcmP (100% identity) | CCWGG | M.Eco2EC1DcmP |
| 8505 | V | V.SflN116DcmP (99% identity) | V.Eco2EC1DcmP | |
| 8510 | drug/metabolite exporter YedA | |||
| 17225 | phage lysis protein EssD | |||
| 17230 | M | M.EcoC1016ORF25P (100% identity) | M.Eco2EC1ORF17230P | |
| 17235 | 67 aa hypothetical protein | |||
| 17265 | LexA family transcriptional regulator | |||
| 17270 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco2EC1ORF17270P |
| 17275 | PerC family transcriptional regulator | |||
| 19055 | 165 aa hypothetical protein | |||
| 19060 | R | EcostT2ORF19975P (100% identity) | GAAC | Eco2EC1ORF19060P |
| 19065 | integrase arm-type DNA-binding domain-containing | |||
| plasmid p2EC1-1 | ||||
| 22315 | 101 aa hypothetical protein | |||
| 22320 | M | M.Sso866ORF27155P (100% identity) | M.Eco2EC1ORF22320P | |
| 22325 | 73 aa hypothetical protein | |||