Salmonella enterica subsp. enterica serovar Typhimurium NCCP 16207 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium NCCP 16207 RM systems
Ref: Do,H.N. et al. unpublished
REBASE ref # 29983
| Sequence length: | GenBank #: | |
| Chromosome: | 4,957,978 bp | CP041976 |
| plasmid unnamed1: | 113,858 bp | CP041974 |
| plasmid unnamed2: | 19,388 bp | CP041975 |
REBASE acronym: Sen16207
Org_num: 38713
All begin FPL16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22175 | restriction endonuclease | |||
| 22180 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen16207ORF22185P |
| 22185 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen16207ORF22185P |
| 22190 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen16207ORF22185P |
| 22195 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3640 | cell division protein DamX | |||
| 3645 | M | M.StyTDamP (100% identity) | GATC | M.Sen16207DamP |
| 3650 | ribulose-phosphate 3-epimerase | |||
| 4130 | DUF2556 domain-containing protein | |||
| 4135 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen16207ORF4135P |
| 4140 | DNA-binding transcriptional regulator Fis | |||
| 10860 | PerC family transcriptional regulator | |||
| 10865 | M | M.StyUK1V (100% identity) | GATC | M.Sen16207ORF10865P |
| 10870 | RusA family crossover junction | |||
| 11120 | phosphohydrolase | |||
| 11125 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen16207DcmP |
| 11130 | V | V.StyUK1DcmP (100% identity) | V.Sen16207DcmP | |
| 11135 | drug/metabolite exporter YedA | |||
| 22335 | BREX system P-loop protein BrxC | |||
| 22340 | RM | StyUK1IV (100% identity) | GATCAG | Sen16207ORF22340P |
| 22345 | AAA family ATPase | |||
| plasmid unnamed1 | ||||
| 80 | 62 aa hypothetical protein | |||
| 85 | M | M.StyUK1ORFAP (100% identity) | M.Sen16207ORF85P | |
| 90 | 73 aa hypothetical protein | |||
| 695 | 62 aa hypothetical protein | |||
| 700 | M | M.StyUK1ORFAP (100% identity) | M.Sen16207ORF700P | |
| 705 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 870 | 74 aa hypothetical protein | |||
| 760 | M | M.StyUK1ORFAP (66% identity) | M.Sen16207ORF760P | |
| 765 | virulence protein SpvA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19670 | 33 aa hypothetical protein | |||
| 19675 | R | StyUK1IP (99% identity) | CAGAG | Sen16207ORF19680P |
| 19680 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen16207ORF19680P |
| 19685 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22170 | BrnT family toxin | |||
| 22175 | R | StyUK1MrrP (100% identity) | Sen16207MrrP | |
| 22180 | type I restriction-modification system | |||