Vibrio parahaemolyticus 20140722001-1 |
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Putative Vibrio parahaemolyticus 20140722001-1 RM systems
Ref: Yang,Q. et al. unpublished
REBASE ref # 30083
| Sequence length: | GenBank #: | |
| chromosome I: | 3,421,899 bp | CP034289 |
| plasmid pVPCZ2014-3: | 71,294 bp | CP034293 |
REBASE acronym: Vpa0011
Org_num: 39072
All begin EHC64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 3240 | IS3 family transposase | |||
| 3245 | S | S.VpaG855ORF1285P (87% identity) | S.Vpa0011ORF3255P | |
| 3250 | anticodon nuclease | |||
| 3255 | M | M.VpaVP17ORF14050P (100% identity) | M.Vpa0011ORF3255P | |
| 3260 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 665 | site-specific integrase | |||
| 670 | R | Vpa0081ORF675P (99% identity) | Vpa0011ORF675P | |
| ??? | M | M.Vpa0081ORF675P (100% identity) | M.Vpa0011ORF675P | |
| 680 | 411 aa hypothetical protein | |||
| 1915 | cell division protein DamX | |||
| 1920 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa0011DamP |
| 1925 | ribulose-phosphate 3-epimerase | |||
| 13480 | 805 aa hypothetical protein | |||
| 13485 | M | M.Vpa114ORF11310P (99% identity) | M.Vpa0011ORF13485P | |
| 13490 | R | Vpa114ORF11310P (100% identity) | Vpa0011ORF13485P | |
| 13495 | recombinase family protein | |||
| plasmid pVPCZ2014-3 | ||||
| 27490 | IS5 family transposase | |||
| 27495 | M | M.VpaVP17ORF25320P (100% identity) | M.Vpa0011ORF27495P | |
| 27500 | 366 aa hypothetical protein | |||