Klebsiella pneumoniae subsp. pneumoniae KP-8788 |
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Putative Klebsiella pneumoniae subsp. pneumoniae KP-8788 RM systems
Ref: Coppi,M. et al. unpublished
REBASE ref # 29742
| Sequence length: | GenBank #: | |
| Chromosome: | 5,389,402 bp | CP037928 |
| plasmid p8788-IT: | 102,851 bp | CP037930 |
| plasmid pKPN-IT-8788: | 271,781 bp | CP037929 |
REBASE acronym: Kpn8788
Org_num: 37857
All begin E2E32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p8788-IT | ||||
| 28885 | 71 aa hypothetical protein | |||
| 28890 | M | M.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | M.Kpn8788ORF28890P |
| 28895 | S | S.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | S.Kpn8788ORF28890P |
| 28900 | R | Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | Kpn8788ORF28890P |
| 28905 | ISL3-like element ISKpn25 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1855 | cell division protein DamX | |||
| 1860 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn8788DamP |
| 1865 | ribulose-phosphate 3-epimerase | |||
| 6375 | TraR/DksA family transcriptional regulator | |||
| 6380 | M | M.Ksp1927ORF4530P (100% identity) | M.Kpn8788ORF6380P | |
| 6385 | replication endonuclease | |||
| 7140 | 60 aa hypothetical protein | |||
| 7145 | M | M.Kpni512ORF1337P (100% identity) | M.Kpn8788ORF7145P | |
| 7150 | DUF1317 family protein | |||
| 9725 | phosphohydrolase | |||
| 9730 | M | M.Kqu6DcmP (82% identity) | CCWGG | M.Kpn8788DcmP |
| 9735 | V | V.KspC31DcmP (75% identity) | V.Kpn8788DcmP | |
| 9740 | drug/metabolite exporter YedA | |||
| 16185 | regulator | |||
| 16190 | M | M.Ksp1927ORF14405P (100% identity) | M.Kpn8788ORF16190P | |
| 16195 | 104 aa hypothetical protein | |||
| 23965 | HNH endonuclease | |||
| 23970 | R | KpnvKP9ORFAP (100% identity) | Kpn8788ORF23970P | |
| 23975 | 88 aa hypothetical protein | |||
| plasmid p8788-IT | ||||
| 29465 | 73 aa hypothetical protein | |||
| 29470 | M | M.SmaBWH35ORF25885P (100% identity) | M.Kpn8788ORF29470P | |
| 29475 | 67 aa hypothetical protein | |||
| plasmid pKPN-IT-8788 | ||||
| 28020 | resolvase | |||
| 28025 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn8788ORF28030P |
| ??? | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Kpn8788ORF28030P |
| 28035 | IS1 family transposase | |||
| 28815 | DUF1317 family protein | |||
| 28820 | M | M.Kpni512ORF1337P (100% identity) | M.Kpn8788ORF28820P | |
| 28825 | 60 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9585 | shufflon system plasmid conjugative transfer | |||
| 9590 | R | Kpni512ORF1793P (100% identity) | CGCATC | Kpn8788ORF9595P |
| 9595 | M | M.Kpni512ORF1793P (100% identity) | CGCATC | M.Kpn8788ORF9595P |
| 9600 | SpnT protein | |||