Escherichia coli 22134 |
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Putative Escherichia coli 22134 RM systems
Ref: Naithani,A. et al. unpublished
REBASE ref # 29687
| Sequence length: | GenBank #: | |
| Chromosome: | 4,803,482 bp | CP026929 |
| plasmid p22134-1: | 129,230 bp | CP026930 |
| plasmid p22134-2: | 62,471 bp | CP026931 |
REBASE acronym: Eco22134
Org_num: 37686
All begin C4962_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21510 | DUF4942 domain-containing protein | |||
| 21515 | M | M.SflN110ORF19045P (100% identity) | M.Eco22134ORF21515P | |
| ??? | S | S.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | S.Eco22134ORF21515P |
| 21530 | R | SflN110ORF19045P (100% identity) | Eco22134ORF21515P | |
| 26470 | 52 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2050 | cell division protein DamX | |||
| 2055 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco22134DamP |
| 2060 | ribulose-phosphate 3-epimerase | |||
| 2705 | DUF2556 family protein | |||
| 2710 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco22134ORF2710P |
| 2715 | DNA-binding transcriptional regulator Fis | |||
| 9975 | phosphohydrolase | |||
| 9980 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco22134DcmP |
| 9985 | V | V.SsoSE61DcmP (100% identity) | V.Eco22134DcmP | |
| 9990 | drug/metabolite exporter YedA | |||
| 10565 | recombination protein NinB | |||
| 10570 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco22134ORF10570P |
| 10575 | NinE family protein | |||
| 12440 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco22134ORF12445P | |
| 12450 | IS66-like element ISEc22 family transposase | |||
| 19525 | BREX-1 system phosphatase PglZ type A | |||
| 19530 | RM | EcoPSJ42ORF40060P (100% identity) | CANCATC | Eco22134ORF19530P |
| 19535 | BREX system P-loop protein BrxC | |||
| 19570 | zinc ribbon domain-containing protein | |||
| 19575 | M | M.KpnFF77ORF20840P (100% identity) | GGTACC | M.Eco22134ORF19575P |
| 19580 | tyrosine-type recombinase/integrase | |||
| 21490 | HNH endonuclease | |||
| 21495 | R | SflSTLE4ORF19250P (99% identity) | Eco22134ORF21495P | |
| 21500 | McrC family protein | |||
| 21940 | sigma 54-interacting transcriptional regulator | |||
| 21945 | R | SflFF87ORF20150P (100% identity) | Eco22134ORF21945AP | |
| 21955 | IS21-like element IS100 family transposase | |||
| 21960 | AAA family ATPase | |||
| ??? | R | Cam165ORF6585P (18% identity) | Eco22134ORF21945BP | |
| 21970 | IS3 family transposase | |||
| plasmid p22134-1 | ||||
| 25580 | 73 aa hypothetical protein | |||
| 25585 | M | M.SdyFF51ORF24515P (100% identity) | M.Eco22134ORF25585P | |
| 25595 | 97 aa hypothetical protein | |||
| plasmid p22134-2 | ||||
| 25800 | 103 aa hypothetical protein | |||
| 25810 | M | M.Esp9308ORFCP (82% identity) | M.Eco22134ORF25810P | |
| 25815 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21495 | HNH endonuclease | |||
| 21500 | R | SflSTLE4McrCP (100% identity) | Eco22134McrCP | |
| 21505 | R | SflSTLE4McrBP (100% identity) | Eco22134McrBP | |
| 21510 | DUF4942 domain-containing protein | |||