Salmonella enterica subsp. enterica serovar Typhimurium RM13672 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium RM13672 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 26716
| Sequence length: | GenBank #: | |
| Chromosome: | 4,870,266 bp | CP047323 |
| plasmid pRM13672: | 93,832 bp | CP047324 |
REBASE acronym: Sen13672
Org_num: 38714
All begin GTH51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23180 | endoribonuclease SymE | |||
| 23185 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen13672ORF23190P |
| 23190 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen13672ORF23190P |
| 23195 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen13672ORF23190P |
| 23200 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6175 | ead/Ea22-like family protein | |||
| 6180 | M | M.Sens29958ORF6205P (100% identity) | M.Sen13672ORF6180P | |
| 6185 | DUF550 domain-containing protein | |||
| 10280 | drug/metabolite exporter YedA | |||
| 10285 | V | V.StyUK1DcmP (100% identity) | V.Sen13672DcmP | |
| 10290 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen13672DcmP |
| 10295 | phosphohydrolase | |||
| 10525 | RusA family crossover junction | |||
| 10530 | M | M.StyUK1V (100% identity) | GATC | M.Sen13672ORF10530P |
| 10535 | PerC family transcriptional regulator | |||
| 17450 | DNA-binding transcriptional regulator Fis | |||
| 17455 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen13672ORF17455P |
| 17460 | DUF2556 domain-containing protein | |||
| 17945 | ribulose-phosphate 3-epimerase | |||
| 17950 | M | M.StyTDamP (100% identity) | GATC | M.Sen13672DamP |
| 17955 | cell division protein DamX | |||
| 23030 | AAA family ATPase | |||
| 23035 | RM | StyUK1IV (100% identity) | GATCAG | Sen13672ORF23035P |
| 23040 | BREX system P-loop protein BrxC | |||
| plasmid pRM13672 | ||||
| 23865 | 118 aa hypothetical protein | |||
| 23870 | M | M.StyUK1ORFAP (100% identity) | M.Sen13672ORF23870P | |
| 23875 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | MFS transporter | |||
| 1820 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen13672ORF1820P |
| 1825 | R | StyUK1IP (99% identity) | CAGAG | Sen13672ORF1820P |
| 1830 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23195 | type I restriction-modification system | |||
| 23200 | R | StyUK1MrrP (100% identity) | Sen13672MrrP | |
| 23205 | BrnT family toxin | |||