Escherichia coli BEN2908 |
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Putative Escherichia coli BEN2908 RM systems
Ref: Trotereau,A. and Schouler,C. unpublished
REBASE ref # 29689
Complete sequence: 5,061,728 bp
GenBank #: LR740776
REBASE acronym: Eco2908
Org_num: 37691
All begin APEC2908_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4546 | DNA-binding protein | |||
| 4547 | M | M.Ecos641ORF18845P (100% identity) | M.Eco2908ORF4547P | |
| ??? | S | S.EcoWH398ORF26840P (100% identity) | S.Eco2908ORF4547P | |
| 4549 | R | EcoW087ORF4400P (100% identity) | Eco2908ORF4547P | |
| 4550 | 232 aa conserved hypothetical protein | |||
| 4799 | 113 aa conserved hypothetical protein | |||
| 4800 | S | S.EcosS1ORF16790P (99% identity) | CCANNNNNNNCTTC | S.Eco2908ORF4801P |
| 4801 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco2908ORF4801P |
| 4802 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco2908ORF4801P |
| 4803 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1949 | 306 aa conserved hypothetical protein; putative inner | |||
| 1950 | V | V.EcoF18DcmP (100% identity) | V.Eco2908DcmP | |
| 1951 | M | M.EcoF18DcmP (100% identity) | CCWGG | M.Eco2908DcmP |
| 1952 | metal-dependent phosphohydrolase | |||
| 2825 | protein of unknown function | |||
| 2826 | M | M.EcoW087ORF6160P (60% identity) | M.Eco2908ORF2826P | |
| 2827 | CPS-53 (KpLE1) prophage; protein YzyA | |||
| 3482 | global DNA-binding transcriptional dual | |||
| 3483 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco2908ORF3483P |
| 3484 | 59 aa conserved hypothetical protein; putative | |||
| 3601 | D-ribulose-5-phosphate 3-epimerase | |||
| 3602 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2908DamP |
| 3603 | 428 aa hypothetical protein | |||
| 4221 | protein of unknown function | |||
| 4222 | M | M.EcoSCU109ORF25P (100% identity) | M.Eco2908ORF4222P | |
| 4223 | conserved protein of unknown function | |||
| 4751 | protein of unknown function | |||
| 4752 | R | Ecoi127aORF4076P (100% identity) | Eco2908ORF4752P | |
| 4753 | 326 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2784 | protein of unknown function | |||
| 2785 | R | EspFAAGmrSDP (100% identity) | Eco2908GmrSDP | |
| 2786 | site-specific DNA recombinase; e14 prophage | |||
| 4802 | endonuclease R | |||
| 4803 | R | EcosS1MrrP (100% identity) | Eco2908MrrP | |
| 4804 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1114 | P21 prophage-derived protein NinB | |||
| 1115 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco2908ORF1115P |
| 1116 | protein of unknown function | |||