Escherichia coli BEN5202 |
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Putative Escherichia coli BEN5202 RM systems
Ref: Trotereau,A. and Schouler,C. unpublished
REBASE ref # 29689
Complete sequence: 5,116,815 bp
GenBank #: LR740758
REBASE acronym: Eco5202
Org_num: 37692
All begin APEC5202_, APEC5202_MISCRNA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3350 | conserved protein of unknown function | |||
| 3351 | R | EcoLR31ORF17520P (100% identity) | Eco5202ORF3354P | |
| 3352 | Membrane protein | |||
| 3353 | S | S.EcoLR31ORF17520P (100% identity) | S.Eco5202ORF3354P | |
| 3354 | M | M.SenSI167ORF3215P (100% identity) | M.Eco5202ORF3354P | |
| 3355 | Group II intron reverse transcriptase/maturase | |||
| 4866 | 113 aa conserved hypothetical protein | |||
| 4867 | S | S.SflC32ORFCP (100% identity) | S.Eco5202ORF4868P | |
| 4868 | M | M.SspS13ORF3945P (100% identity) | M.Eco5202ORF4868P | |
| 4869 | R | SflC32ORFCP (100% identity) | Eco5202ORF4868P | |
| 4870 | conserved membrane protein of unknown function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1178 | metal-dependent phosphohydrolase | |||
| 1179 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco5202DcmP |
| 1180 | V | V.EcosEC7DcmP (100% identity) | V.Eco5202DcmP | |
| 1181 | 306 aa conserved hypothetical protein; putative inner | |||
| 95 | pseudogene | |||
| 1819 | M | M.EcoY26ORF70P (100% identity) | A | M.Eco5202ORF1819P |
| 1820 | conserved protein of unknown function | |||
| 2573 | conserved protein of unknown function | |||
| 2574 | M | M.EcoF356ORF14255P (99% identity) | M.Eco5202ORF2574P | |
| 2575 | conserved protein of unknown function | |||
| 2722 | replication endonuclease from | |||
| 2723 | M | M.SspS13ORF8710P (99% identity) | GATC | M.Eco5202ORF2723P |
| 2724 | Phage/conjugal plasmid C-4 type zinc finger | |||
| 2777 | LexA DNA binding domain protein | |||
| 2778 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco5202ORF2778P |
| 2779 | 162 aa hypothetical protein; CPS-53 (KpLE1) prophage | |||
| 3558 | global DNA-binding transcriptional dual | |||
| 3559 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco5202ORF3559P |
| 3560 | 59 aa conserved hypothetical protein; putative | |||
| 3675 | D-ribulose-5-phosphate 3-epimerase | |||
| 3676 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco5202DamP |
| 3677 | 428 aa hypothetical protein | |||
| 4439 | conserved protein of unknown function | |||
| 4440 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco5202ORF4440P |
| 4441 | LexA family transcriptional regulator | |||
| 4447 | Phage protein | |||
| 4448 | M | M.Sso63633ORF22290P (100% identity) | M.Eco5202ORF4448P | |
| 4449 | phage lysis protein S; DLP12 prophage | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2738 | conserved protein of unknown function | |||
| 2739 | R | EspFAAGmrSDP (100% identity) | Eco5202GmrSDP | |
| 2740 | Inversion of adjacent DNA at locus of e14 | |||