Variovorax species SRS16 |
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Putative Variovorax species SRS16 RM systems
Ref: Werner,J. unpublished
REBASE ref # 27831
| Sequence length: | GenBank #: | |
| chromosome 1: | 5,762,991 bp | LR594666 |
| plasmid 2: | 801,406 bp | LR594667 |
| plasmid 5: | 71,057 bp | LR594670 |
REBASE acronym: VspSRS16
Org_num: 38998
All begin SRS16CHR_, SRS16P1_, SRS16P4_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3362 | Succinylglutamate desuccinylase / Aspartoacylase | |||
| 3363 | M | M.VspPBLE5ORF3370P (99% identity) | M.VspSRS16ORF3363P | |
| 3364 | S | S.VspPBLE5ORF3370P (98% identity) | S.VspSRS16ORF3363P | |
| 3365 | LIV-I protein F | |||
| 5487 | 247 aa hypothetical protein | |||
| 5488 | R | VspPBLE5ORF5439P (97% identity) | VspSRS16ORF5490P | |
| 5489 | S | S1.VspPBLE5ORF5439P (96% identity) | S1.VspSRS16ORF5490P | |
| 5490 | M | M.VspPBLE5ORF5439P (99% identity) | M.VspSRS16ORF5490P | |
| 5491 | S | S2.VspPBLE5ORF5439P (97% identity) | S2.VspSRS16ORF5490P | |
| 5492 | 332 aa hypothetical protein | |||
| plasmid 2 | ||||
| 247 | 69 aa hypothetical protein | |||
| 248 | M | M.VspPBLH6ORF683P (100% identity) | M.VspSRS16ORF248P | |
| 249 | S | S.VspWDL1ORF252P (100% identity) | S.VspSRS16ORF248P | |
| 250 | R | VspPBLH6ORF683P (100% identity) | VspSRS16ORF248P | |
| 251 | 154 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4432 | 298 aa hypothetical protein | |||
| 4433 | M | M.Bsp21005ORF12675P (70% identity) | M.VspSRS16ORF4433P | |
| 4434 | 111 aa hypothetical protein | |||
| 5203 | H(+)/Cl(-) exchange transporter ClcA | |||
| 5204 | R | VspPBLE5ORF5161P (98% identity) | VspSRS16ORF5205P | |
| 5205 | M | M.VspPBLE5ORF5161P (82% identity) | M.VspSRS16ORF5205P | |
| 5206 | Excinuclease ABC subunit A | |||
| plasmid 2 | ||||
| 700 | 96 aa hypothetical protein | |||
| 701 | M | M.VspPBLH6ORF201P (100% identity) | M.VspSRS16ORF701P | |
| 702 | 131 aa hypothetical protein | |||
| 846 | Tyrosine recombinase XerC | |||
| 847 | R | VspPBLH6ORF55P (100% identity) | VspSRS16ORF847P | |
| 848 | 338 aa hypothetical protein | |||
| 847 | 374 aa hypothetical protein | |||
| 848 | M | M2.VspPBLH6ORF53P (100% identity) | M1.VspSRS16ORF848P | |
| 849 | M | M1.VspPBLH6ORF53P (100% identity) | M2.VspSRS16ORF848P | |
| 850 | 118 aa hypothetical protein | |||
| plasmid 5 | ||||
| 41 | Plasmid replication initiator protein TrfA | |||
| 42 | R | VspRA8ORF43P (100% identity) | VspSRS16ORF43P | |
| 43 | M | M.VspRA8ORF43P (100% identity) | M.VspSRS16ORF43P | |
| 44 | Transposase, TnpA family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3564 | High temperature protein G | |||
| 3565 | R | Sna507IIP (87% identity) | VspSRS16ORF3566P | |
| 3566 | M | M.Asp5MLIRORF12810P (77% identity) | M.VspSRS16ORF3566P | |
| 3567 | 244 aa hypothetical protein | |||