Variovorax species PBL-H6 |
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Putative Variovorax species PBL-H6 RM systems
Ref: Werner,J. unpublished
REBASE ref # 27831
| Sequence length: | GenBank #: | |
| chromosome 1: | 5,990,237 bp | LR594659 |
| plasmid 2: | 839,194 bp | LR594660 |
REBASE acronym: VspPBLH6
Org_num: 38995
All begin H6CHR_, H6P1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2337 | D-malate degradation protein R | |||
| 2338 | S | S.VspRA8ORF2705P (92% identity) | S.VspPBLH6ORF2339P | |
| 2339 | M | M.VspRA8ORF2705P (94% identity) | M.VspPBLH6ORF2339P | |
| 2340 | Succinylglutamate desuccinylase / Aspartoacylase | |||
| 5575 | WLM domain protein | |||
| 5576 | R | VspWDL1ORF3207P (82% identity) | VspPBLH6ORF5578P | |
| 5577 | 39 aa hypothetical protein | |||
| 5578 | M | M.VspRA8ORF6146P (87% identity) | M.VspPBLH6ORF5578P | |
| 5579 | S | S.VspPBSH4ORF6048P (86% identity) | S.VspPBLH6ORF5578P | |
| 5580 | 364 aa hypothetical protein | |||
| plasmid 2 | ||||
| 680 | 154 aa hypothetical protein | |||
| 681 | R | VspSRS16ORF248P (100% identity) | VspPBLH6ORF683P | |
| 682 | S | S.VspWDL1ORF252P (100% identity) | S.VspPBLH6ORF683P | |
| 683 | M | M.VspSRS16ORF248P (100% identity) | M.VspPBLH6ORF683P | |
| 684 | 69 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 86 | 458 aa hypothetical protein | |||
| 87 | M | M.PspS35ORF25785P (74% identity) | M.VspPBLH6ORF87P | |
| 88 | Modification methylase MboII | |||
| 305 | 280 aa hypothetical protein | |||
| 306 | R | Bce384ORF30P (87% identity) | VspPBLH6ORF306P | |
| 307 | Modification methylase HaeIII | |||
| 306 | 368 aa hypothetical protein | |||
| 307 | M | M.Bce384ORF30P (83% identity) | M.VspPBLH6ORF307P | |
| 308 | 68 aa hypothetical protein | |||
| 3957 | 506 aa hypothetical protein | |||
| 3958 | V | V.VspPBSH4ORF4176P (98% identity) | V.VspPBLH6ORF3960P | |
| 3959 | 610 aa hypothetical protein | |||
| 3960 | M | M.VspPBSH4ORF4176P (98% identity) | M.VspPBLH6ORF3960P | |
| 3961 | 89 aa hypothetical protein | |||
| plasmid 2 | ||||
| 52 | 118 aa hypothetical protein | |||
| 53 | M | M2.VspSRS16ORF848P (100% identity) | M1.VspPBLH6ORF53P | |
| 54 | M | M1.VspSRS16ORF848P (100% identity) | M2.VspPBLH6ORF53P | |
| 55 | 374 aa hypothetical protein | |||
| 54 | 338 aa hypothetical protein | |||
| 55 | R | VspSRS16ORF847P (100% identity) | VspPBLH6ORF55P | |
| 56 | Tyrosine recombinase XerC | |||
| 200 | 131 aa hypothetical protein | |||
| 201 | M | M.VspSRS16ORF701P (100% identity) | M.VspPBLH6ORF201P | |
| 202 | 96 aa hypothetical protein | |||