Ref: Zhenavchuk,O.F. et al. unpublished

REBASE ref # 30073

Sequence length:GenBank #:
Chromosome: 6,377,767 bp CP047242
plasmid unnamed1: 362,032 bp CP047243
plasmid unnamed2: 293,397 bp CP047244
plasmid unnamed4: 27,054 bp CP047246

REBASE acronym: Tva0441

Org_num: 38986

 

All begin GSQ19_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
11035 DUF45 domain-containing protein
11040 R AvrIVP (100% identity) Tva0441ORF11055P
11045 transcriptional regulator
11050 S S.AvrIV (100% identity) S.Tva0441ORF11055P
11055 M M.AvrIV (100% identity) M.Tva0441ORF11055P
11060 MerR family transcriptional regulator
 
22170 DUF4325 domain-containing protein
22175 S S.AvrVII (100% identity) S.Tva0441ORF22195P
22180 72 aa hypothetical protein
22185 PIN domain-containing protein
22190 86 aa hypothetical protein
22195 M M.AvrVII (100% identity) M.Tva0441ORF22195P
22200 330 aa hypothetical protein
22205 R AvrVIIP (100% identity) Tva0441ORF22195P
22210 AbrB/MazE/SpoVT family DNA-binding
 
23355 helix-turn-helix domain-containing protein
23360 M M.AvaBORF3498P (100% identity) M.Tva0441ORF23360P
23365 S S.AvrIII (100% identity) S.Tva0441ORF23360P
23370 UPF0175 family protein
23375 DUF3368 domain-containing protein
23380 R AvrIIIP (100% identity) Tva0441ORF23360P
23385 46 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1535 signal recognition particle protein
1540 M M.AspYBS01ORF23465P (100% identity) M.Tva0441ORF1540P
1545 urea ABC transporter substrate-binding protein
 
1775 cytochrome b/b6 domain-containing protein
1780 M M.AvrVI (100% identity) M.Tva0441ORF1780P
1785 anthranilate phosphoribosyltransferase
 
5635 Uma2 family endonuclease
5640 M M.AvrORFIP (100% identity) CGATCG M.Tva0441ORF5640P
5645 methyltransferase
 
8870 deoxyribose-phosphate aldolase
8875 M M.AvrORFHP (100% identity) M.Tva0441ORF8875P
8880 DUF697 domain-containing protein
 
11880 helicase
11885 RM AvrORFFP (100% identity) Tva0441ORF11885P
11890 IS200/IS605 family transposase
 
16245 DUF3883 domain-containing protein
16250 M M.AvrORFQP (100% identity) M.Tva0441ORF16250P
16255 147 aa hypothetical protein
 
16335 DGQHR domain-containing protein
16340 M M.AvrDndCP (100% identity) M.Tva0441DndCP
16345 DNA sulfur modification protein DndD
 
16340 DNA phosphorothioation system sulfurtransferase
16345 M M.AvrDndDP (100% identity) M.Tva0441DndDP
16350 DNA sulfur modification protein DndE
 
16345 DNA sulfur modification protein DndD
16350 M M.AvrDndEP (100% identity) M.Tva0441DndEP
16355 tetratricopeptide repeat protein
 
18470 59 aa hypothetical protein
18475 M M.AvrORFRP (100% identity) M.Tva0441ORF18475P
18485 79 aa hypothetical protein
 
19005 DUF427 domain-containing protein
19010 M M.AvrV (100% identity) GATC M.Tva0441ORF19010P
19015 DUF751 domain-containing protein
 
20810 70 aa hypothetical protein
20815 M M.AvrORFDP (100% identity) M.Tva0441ORF20815P
20820 cyanase
 
21715 DUF3493 domain-containing protein
21725 R AvaBORF3181P (100% identity) CYCGRG Tva0441ORF21730P
21730 M M.AvrORFCP (100% identity) M.Tva0441ORF21730P
21735 M28 family peptidase
 
plasmid unnamed1
 
28110 ASCH domain-containing protein
28115 M M.AvrORFLP (100% identity) M.Tva0441ORF28115P
28120 DUF1392 domain-containing protein
 
plasmid unnamed2
 
29240 DEAD/DEAH box helicase family protein
29245 M M.AvrORFMP (100% identity) M.Tva0441ORF29245P
29250 195 aa hypothetical protein
 
29285 AAA family ATPase
29290 RM AvaBORF223P (100% identity) Tva0441ORF29290P
29295 GNAT family N-acetyltransferase
 
plasmid unnamed4
 
29580 84 aa hypothetical protein
29585 RM AvrORFOP (100% identity) Tva0441ORF29585P
29590 S S.AvrORFOP (68% identity) S.Tva0441ORF29585P
29595 AAA family ATPase
Type IV
ORF Gene Most similar Specificity Name
 
plasmid unnamed1
 
26890 AAA family ATPase
26895 R AvrMrrP (100% identity) Tva0441MrrP
26900 72 aa hypothetical protein