Pseudomonas species S04 |
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Putative Pseudomonas species S04 RM systems
Ref: Hunziker,L. et al. Appl. Environ. Microbiol. 81 (3), 821-830 (2015)
REBASE ref # 29486
Complete sequence: 6,098,669 bp
GenBank #: CP019427
REBASE acronym: PspS04
Org_num: 37267
All begin PspS04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3595 | 104 aa hypothetical protein | |||
| 3600 | R | PspS19ORF3610P (100% identity) | CGTANNNNNGTC | PspS04IP |
| 3605 | S | S.PspS19ORF3610P (100% identity) | CGTANNNNNGTC | S.PspS04I |
| 3610 | M | M.PspS19ORF3610P (100% identity) | CGTANNNNNGTC | M.PspS04I |
| 3615 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9765 | 120 aa hypothetical protein | |||
| 9770 | M | M.PspS19DndDP (100% identity) | M.PspS04DndDP | |
| 9775 | sulfurtransferase DndC | |||
| 9770 | DNA sulfur modification protein DndD | |||
| 9775 | M | M.PspS19DndCP (100% identity) | M.PspS04DndCP | |
| 9780 | DNA sulfur modification protein DndB | |||
| 9775 | sulfurtransferase DndC | |||
| 9780 | M | M.PspS19DndBP (100% identity) | M.PspS04DndBP | |
| 9785 | relaxase | |||
| 12110 | lysis protein | |||
| 12115 | M | M.PspS19ORF12120P (100% identity) | M.PspS04ORF12115P | |
| 12120 | peptidase S24 | |||