Pseudomonas chlororaphis R47 |
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Putative Pseudomonas chlororaphis R47 RM systems
Ref: Hunziker,L. et al. Appl. Environ. Microbiol. 81 (3), 821-830 (2015)
REBASE ref # 29486
Complete sequence: 7,197,297 bp
GenBank #: CP019399
REBASE acronym: PclR47
Org_num: 37232
All begin PchlR47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12445 | restriction endonuclease | |||
| 12450 | R | PchPA23IP (99% identity) | GAGNNNNNNVTGAC | PclR47ORF12460P |
| ??? | S | S.PchPA23I (97% identity) | GAGNNNNNNVTGAC | S.PclR47ORF12460P |
| 12460 | M | M.PchPA23I (100% identity) | GAGNNNNNNVTGAC | M.PclR47ORF12460P |
| 12465 | fructose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10225 | Pyocin activator protein PrtN | |||
| 10230 | M | M.PchB162ORF18285P (92% identity) | M.PclR47ORF10230P | |
| 10235 | 77 aa hypothetical protein | |||
| 10435 | 175 aa hypothetical protein | |||
| 10440 | M | M.PchPS5ORF15275P (58% identity) | M.PclR47ORF10440P | |
| 10445 | 376 aa hypothetical protein | |||
| 17735 | 78 aa hypothetical protein | |||
| 17740 | M | M.PchRT02ORF16635P (100% identity) | M.PclR47ORF17740P | |
| 17745 | lysis protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12440 | HNH endonuclease | |||
| 12445 | R | PchPA23MrrP (100% identity) | PclR47MrrP | |
| 12450 | restriction endonuclease subunit R | |||