Lactobacillus species JM1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus species JM1 RM systems
Ref: Sun,L. unpublished
REBASE ref # 25492
Complete sequence: 1,996,913 bp
GenBank #: CP044412
REBASE acronym: LspJM1
Org_num: 38189
All begin F3I00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5705 | 463 aa hypothetical protein | |||
| 5710 | S | S1.LgaK7ORF6265P (99% identity) | S2.LspJM1ORF5725P | |
| 5715 | site-specific integrase | |||
| 5720 | S | S2.LgaK7ORF6265P (60% identity) | S1.LspJM1ORF5725P | |
| 5725 | M | M.LgaK7ORF6265P (100% identity) | M.LspJM1ORF5725P | |
| 5730 | R | LgaK7ORF6265P (99% identity) | LspJM1ORF5725P | |
| 5735 | DUF3800 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 135 | tyrosine-type recombinase/integrase | |||
| 140 | M | M.Lul93C1ORF150P (100% identity) | M.LspJM1ORF140P | |
| 145 | 301 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7870 | 431 aa hypothetical protein | |||
| 7875 | R | LgaK7ORF8130P (99% identity) | LspJM1ORF7880P | |
| 7880 | M | M.LgaK7ORF8130P (100% identity) | M.LspJM1ORF7880P | |
| 7885 | adenine methyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 280 | exodeoxyribonuclease III | |||
| ??? | R | LgaK7ORF740P (100% identity) | LspJM1ORF285P | |
| 290 | alpha/beta hydrolase | |||