Pseudomonas species J380 |
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Putative Pseudomonas species J380 RM systems
Ref: Santander,J. et al. unpublished
REBASE ref # 29502
Complete sequence: 6,261,650 bp
GenBank #: CP043060
REBASE acronym: PspJ380
Org_num: 37259
All begin FXO12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23250 | isochorismatase family protein | |||
| 23255 | M | M.Pch332ORF13590P (99% identity) | CAANNNNNNNNCTGG | M.PspJ380I |
| 23260 | S | S.Pch332ORF13590P (99% identity) | CAANNNNNNNNCTGG | S.PspJ380I |
| 23265 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 170 | 72 aa hypothetical protein | |||
| 175 | M | M.Pya27247ORF1038P (97% identity) | M.PspJ380ORF175P | |
| 180 | 111 aa hypothetical protein | |||
| 645 | 216 aa hypothetical protein | |||
| 650 | M | M.PliDMSP1ORFCP (65% identity) | M.PspJ380ORF650P | |
| 655 | 108 aa hypothetical protein | |||
| 3930 | Com family DNA-binding transcriptional | |||
| 3935 | M | M.PlaKK4ORFCP (99% identity) | M.PspJ380ORF3935P | |
| 3940 | helix-turn-helix domain-containing protein | |||
| 10490 | 138 aa hypothetical protein | |||
| 10495 | M | M.Psy2190ORF4761P (94% identity) | M.PspJ380ORF10495P | |
| 10500 | 188 aa hypothetical protein | |||
| 21340 | 522 aa hypothetical protein | |||
| 21345 | M | M.Psp056ORF25550P (96% identity) | M.PspJ380ORF21345P | |
| 21350 | 95 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10470 | 382 aa hypothetical protein | |||
| 10475 | R | Psy2190ORF4756P (99% identity) | GAGATC | PspJ380IIP |
| 10480 | M | M.Psy2190ORF4756P (99% identity) | GAGATC | M.PspJ380II |
| 10485 | DUF2188 domain-containing protein | |||