Lactobacillus crispatus DC21.1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus crispatus DC21.1 RM systems
Ref: Richards,P.J. et al. unpublished
REBASE ref # 29761
Complete sequence: 2,023,061 bp
GenBank #: CP039266
REBASE acronym: LcrDC211
Org_num: 37998
All begin E6A57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5570 | CPBP family intramembrane metalloprotease | |||
| 5575 | R | Lcr33820ORF5385P (96% identity) | LcrDC211ORF5580P | |
| 5580 | M | M.Lcr1c83ORFBP (99% identity) | M.LcrDC211ORF5580P | |
| 5585 | S | S1.Lcr1DORF6195P (62% identity) | S1.LcrDC211ORF5580P | |
| 5590 | site-specific integrase | |||
| ??? | S | S2.Lcr1DORF6195P (24% identity) | S2.LcrDC211ORF5580P | |
| 5595 | IS256 family transposase | |||
| 5600 | S | S1.Lcr1DORF6195P (42% identity) | S3.LcrDC211ORF5580P | |
| 5605 | Mrr restriction system protein | |||
| 7735 | DUF2513 domain-containing protein | |||
| 7740 | S | S.LamL4ORF1820P (71% identity) | S.LcrDC211ORF7745P | |
| 7745 | M | M.Lac30ORF8410P (97% identity) | M.LcrDC211ORF7745P | |
| 7750 | R | LspC25ORF3020P (98% identity) | LcrDC211ORF7745P | |
| 7755 | 251 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4125 | TIGR02452 family protein | |||
| 4130 | M | M.AkuB410MORF10930P (63% identity) | M.LcrDC211ORF4130P | |
| 4135 | R | Lcr5810ORFAP (95% identity) | LcrDC211ORF4130P | |
| 4140 | AraC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 260 | amino acid permease | |||
| 265 | R | LspC25ORF405P (99% identity) | LcrDC211ORF265P | |
| 270 | class A beta-lactamase-related serine hydrolase | |||