Escherichia coli C27A |
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Putative Escherichia coli C27A RM systems
Ref: Nadimpalli,M. unpublished
REBASE ref # 29295
| Sequence length: | GenBank #: | |
| Chromosome: | 4,682,770 bp | CP044305 |
| plasmid pC27A-3: | 134,570 bp | CP044308 |
| plasmid pC27A-CTX-M-55: | 264,269 bp | CP044306 |
REBASE acronym: EcoC27A
Org_num: 36679
All begin F4W66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8935 | M48 family metallopeptidase | |||
| 8940 | R | EcosNDM5ORF9185P (100% identity) | EcoC27AORF8940P | |
| 8945 | cold-shock protein | |||
| 14735 | GTPase family protein | |||
| 14740 | M | M.Efe28C21ORF8915P (99% identity) | M.EcoC27AORF14740P | |
| 14745 | S | S.EcoWP2ORF6710P (79% identity) | S.EcoC27AORF14740P | |
| 14750 | R | Eco2BORF7975P (96% identity) | EcoC27AORF14740P | |
| 14755 | IS5-like element ISKpn26 family transposase | |||
| 20075 | helix-turn-helix domain-containing protein | |||
| 20080 | M | M.Pre393ORF2750P (100% identity) | M.EcoC27AORF20080P | |
| 20085 | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoC27AORF20080P | |
| 20090 | RecQ family ATP-dependent DNA helicase | |||
| 20095 | DNA-processing protein DprA | |||
| 20100 | R | EcotcmA3ORF16550P (100% identity) | EcoC27AORF20080P | |
| 20105 | mannose-6-phosphate isomerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 430 | 93 aa hypothetical protein | |||
| 435 | M | M.Sbo812ORFAP (100% identity) | M.EcoC27AORF435P | |
| 440 | DUF1317 family protein | |||
| 9265 | drug/metabolite exporter YedA | |||
| 9270 | V | V.EcosEC7DcmP (100% identity) | V.EcoC27ADcmP | |
| 9275 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoC27ADcmP |
| 9280 | phosphohydrolase | |||
| 15860 | DNA-binding transcriptional regulator Fis | |||
| 15865 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoC27AORF15865P |
| 15870 | DUF2556 domain-containing protein | |||
| 16515 | ribulose-phosphate 3-epimerase | |||
| 16520 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC27ADamP |
| 16525 | cell division protein DamX | |||
| plasmid pC27A-3 | ||||
| 25380 | 45 aa hypothetical protein | |||
| 25385 | M | M.CfrB38ORF2936P (39% identity) | M.EcoC27AORF25385P | |
| 25390 | DUF1317 family protein | |||
| plasmid pC27A-CTX-M-55 | ||||
| 22965 | DUF1173 domain-containing protein | |||
| 22970 | M | M.YpsF1ORFCP (100% identity) | M.EcoC27AORF22970P | |
| 22975 | thermonuclease family protein | |||
| 23715 | 284 aa hypothetical protein | |||
| 23720 | M | M.YpsF1ORFDP (100% identity) | M.EcoC27AORF23720P | |
| 23725 | DNA-binding protein | |||
| 23870 | 202 aa hypothetical protein | |||
| 23875 | M | M.YpsF1ORFBP (100% identity) | M.EcoC27AORF23875P | |
| 23880 | 108 aa hypothetical protein | |||