Salmonella enterica subsp. enterica serovar 4,[5],12:i:- PNCS014875 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- PNCS014875 RM systems
Ref: Walker,M. and Clark,C. unpublished
REBASE ref # 29152
Complete sequence: 4,996,832 bp
GenBank #: CP037882
REBASE acronym: Sen14875
Org_num: 36186
All begin E1969_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24880 | endoribonuclease SymE | |||
| 24885 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen14875ORF24890P |
| 24890 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen14875ORF24890P |
| 24895 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen14875ORF24890P |
| 24900 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10340 | drug/metabolite exporter YedA | |||
| 10345 | V | very short patch repair endonuclease | V.Sen14875DcmP | |
| 10350 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen14875DcmP |
| 10355 | phosphohydrolase | |||
| 10615 | RusA family crossover junction | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen14875ORF10620P | |
| 10625 | PerC family transcriptional regulator | |||
| 14060 | 92 aa hypothetical protein | |||
| 14065 | M | M.StyTORF1914P (100% identity) | M.Sen14875ORF14065P | |
| 14070 | ead/Ea22-like family protein | |||
| 14755 | thermonuclease family protein | |||
| 14760 | M | M.StyCORF187P (49% identity) | M.Sen14875ORF14760P | |
| 14765 | AraC family transcriptional regulator | |||
| 17275 | replication endonuclease | |||
| 17280 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen14875ORF17280P | |
| 17285 | DUF2732 family protein | |||
| 18215 | DNA-binding transcriptional regulator Fis | |||
| 18220 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen14875ORF18220P |
| 18225 | DUF2556 domain-containing protein | |||
| 18715 | ribulose-phosphate 3-epimerase | |||
| 18720 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen14875DamP |
| 18725 | cell division protein DamX | |||
| 22735 | PerC family transcriptional regulator | |||
| 22740 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen14875ORF22740P |
| 22745 | LexA family transcriptional regulator | |||
| 24725 | ATP-binding protein | |||
| 24730 | RM | StyUK1IV (100% identity) | GATCAG | Sen14875ORF24730P |
| 24735 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1955 | MFS transporter | |||
| 1960 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen14875ORF1960P |
| 1965 | R | StyUK1IP (99% identity) | CAGAG | Sen14875ORF1960P |
| 1970 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24895 | type I restriction-modification system | |||
| 24900 | R | StyUK1MrrP (100% identity) | Sen14875MrrP | |
| 24905 | BrnT family toxin | |||