Salmonella enterica subsp. enterica serovar 4,[5],12:i:- PNCS009777 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- PNCS009777 RM systems
Ref: Walker,M. and Clark,C. unpublished
REBASE ref # 29152
Complete sequence: 4,981,102 bp
GenBank #: CP036174
REBASE acronym: Sen9777
Org_num: 36182
All begin EYC53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24760 | endoribonuclease SymE | |||
| 24765 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen9777ORF24770P |
| 24770 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen9777ORF24770P |
| 24775 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen9777ORF24770P |
| 24780 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10690 | drug/metabolite exporter YedA | |||
| 10695 | V | V.StyUK1DcmP (100% identity) | V.Sen9777DcmP | |
| 10700 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen9777DcmP |
| 10705 | phosphohydrolase | |||
| 10965 | RusA family crossover junction | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen9777ORF10970P | |
| 10975 | PerC family transcriptional regulator | |||
| 14410 | 92 aa hypothetical protein | |||
| 14415 | M | M.StyTORF1914P (100% identity) | M.Sen9777ORF14415P | |
| 14420 | ead/Ea22-like family protein | |||
| 15165 | thermonuclease family protein | |||
| 15170 | M | M.StyCORF187P (49% identity) | M.Sen9777ORF15170P | |
| 15175 | AraC family transcriptional regulator | |||
| 18425 | DNA-binding transcriptional regulator Fis | |||
| 18430 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen9777ORF18430P |
| 18435 | DUF2556 domain-containing protein | |||
| 18925 | ribulose-phosphate 3-epimerase | |||
| 18930 | M | M.StyTDamP (100% identity) | GATC | M.Sen9777DamP |
| 18935 | cell division protein DamX | |||
| 24605 | ATP-binding protein | |||
| 24610 | RM | StyUK1IV (100% identity) | GATCAG | Sen9777ORF24610P |
| 24615 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2305 | MFS transporter | |||
| 2310 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen9777ORF2310P |
| 2315 | R | StyUK1IP (99% identity) | CAGAG | Sen9777ORF2310P |
| 2320 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24775 | type I restriction-modification system | |||
| 24780 | R | StyUK1MrrP (100% identity) | Sen9777MrrP | |
| 24785 | BrnT family toxin | |||