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Putative Lactobacillus delbrueckii TS1-06 RM systems
Ref: Guo,D. et al. unpublished
REBASE ref # 29187
Complete sequence: 1,853,687 bp
GenBank #: CP046390
REBASE acronym: Lde106
Org_num: 36422
All begin GM421_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
275 | 179 aa hypothetical protein | |||
280 | S | S.Lci105ORF4815P (62% identity) | S.Lde106ORF285P | |
285 | M | M.LdeLDBC1ORF4620P (100% identity) | M.Lde106ORF285P | |
290 | R | LdeLDBC1ORF4620P (99% identity) | Lde106ORF285P | |
295 | restriction endonuclease subunit S | |||
9140 | N-6 DNA methylase | |||
9145 | M | M.LdeND04ORF1688P (99% identity) | M.Lde106ORF9145P | |
9150 | S | S3.Lde871ORF440P (57% identity) | S1.Lde106ORF9145P | |
9155 | tyrosine-type recombinase/integrase | |||
9160 | S | S2.Lde20074ORF3175P (97% identity) | S2.Lde106ORF9145P | |
9165 | S | S2.LdeP3MRAORF5415P (77% identity) | S3.Lde106ORF9145P | |
9170 | R | Lde871ORF440P (99% identity) | Lde106ORF9145P | |
9175 | 110 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3790 | ATP-dependent helicase | |||
3795 | RM | LdeL10ORF2940P (99% identity) | Lde106ORF3795P | |
3800 | 199 aa hypothetical protein | |||
9405 | 75 aa hypothetical protein | |||
9410 | RM | LdeCFL1ORF1494P (94% identity) | Lde106ORF9410P | |
9415 | methylase | |||
9410 | restriction endonuclease | |||
9415 | M | M.LdeND04ORF1740P (99% identity) | M.Lde106ORF9415P | |
9420 | GNAT family N-acetyltransferase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
4720 | DUF975 family protein | |||
4725 | R | LdeF36ORF175P (99% identity) | Lde106ORF4725P | |
4730 | 185 aa hypothetical protein | |||
5925 | 275 aa hypothetical protein | |||
5930 | R | LdeF01McrBP (96% identity) | Lde106McrBP | |
5935 | R | LdeLJJMcrCP (98% identity) | Lde106McrCP | |
5940 | transcriptional regulator | |||
6725 | UDP-glucose 4-epimerase GalE | |||
6730 | R | Lde87ORF1537P (99% identity) | Lde106ORF6730P | |
6735 | 102 aa hypothetical protein |