Shewanella algae RQs-106 |
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Putative Shewanella algae RQs-106 RM systems
Ref: Zhou,Y. et al. J. Hazard. Mater. 356, 82-90 (2018)
REBASE ref # 29992
Complete sequence: 4,990,025 bp
GenBank #: CP046378
REBASE acronym: Sal106
Org_num: 38730
All begin GMX02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5570 | DNA-binding protein | |||
| 5575 | M | M.GprHORF4000P (93% identity) | M.Sal106ORF5575P | |
| 5580 | S | S.Kpn1046ORF4770P (52% identity) | S.Sal106ORF5575P | |
| 5585 | RecQ family ATP-dependent DNA helicase | |||
| 5590 | DNA-processing protein DprA | |||
| 5595 | R | SenXB08ORF21250P (89% identity) | Sal106ORF5575P | |
| 5600 | type VI secretion system tube protein Hcp | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13800 | 135 aa hypothetical protein | |||
| 13805 | R | AjeMS1ORF12179P (62% identity) | Sal106ORF13810P | |
| 13810 | M | M.Psp3640ORF3755P (64% identity) | M.Sal106ORF13810P | |
| 13815 | winged helix-turn-helix transcriptional | |||
| 20845 | Com family DNA-binding transcriptional | |||
| 20850 | M | M.SalC6G3ORFDP (91% identity) | M.Sal106ORF20850P | |
| 20855 | 356 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5660 | 133 aa hypothetical protein | |||
| 5665 | R | Sal5466McrBP (99% identity) | Sal106McrBP | |
| 5670 | R | Sal5466McrCP (100% identity) | Sal106McrCP | |
| 5675 | AlpA family phage regulatory protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20395 | DUF2970 domain-containing protein | |||
| 20400 | M | M.Spu10738III (100% identity) | M.Sal106ORF20400P | |
| 20405 | AAA family ATPase | |||