Salmonella enterica subsp. enterica EQAS2016S1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica EQAS2016S1 RM systems
Ref: Hu,Y. et al. unpublished
REBASE ref # 29150
| Sequence length: | GenBank #: | |
| Chromosome: | 4,636,747 bp | CP033360 |
| plasmid pEQAS2016S1-1: | 50,864 bp | CP033359 |
REBASE acronym: Sen16S1
Org_num: 36180
All begin EB781_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4085 | endoribonuclease SymE | |||
| 4090 | S | S.Sens661ORF19445P (100% identity) | GTANNNNNNNNGTTC | S.Sen16S1ORF4095P |
| 4095 | M | M.SenWT8I (100% identity) | GTANNNNNNNNGTTC | M.Sen16S1ORF4095P |
| 4100 | R | Spy5740IP (100% identity) | GTANNNNNNNNGTTC | Sen16S1ORF4095P |
| 4105 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14770 | drug/metabolite exporter YedA | |||
| 14775 | V | V.StyUK1DcmP (100% identity) | V.Sen16S1DcmP | |
| 14780 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen16S1DcmP |
| 14785 | phosphohydrolase | |||
| 21625 | Fis family transcriptional regulator | |||
| 21630 | M | M.SenTC177ORF2255P (100% identity) | ATGCAT | M.Sen16S1ORF21630P |
| 21635 | DUF2556 domain-containing protein | |||
| 22125 | ribulose-phosphate 3-epimerase | |||
| 22130 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen16S1DamP |
| 22135 | cell division protein DamX | |||
| plasmid pEQAS2016S1-1 | ||||
| 435 | recombinase family protein | |||
| 440 | R | Ubap201ORF4P (100% identity) | CCWGG | Sen16S1ORF445P |
| 445 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen16S1ORF445P |
| 450 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6245 | MFS transporter | |||
| 6250 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen16S1ORF6250P |
| 6255 | R | SenSB699ORF9290P (100% identity) | CAGAG | Sen16S1ORF6250P |
| 6260 | 33 aa hypothetical protein | |||