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Putative Gordonia species 135 RM systems
Ref: Vetrova,A. and Valentovich,L. unpublished
REBASE ref # 29712
Sequence length: | GenBank #: | |
Chromosome: | 5,039,827 bp | CP046257 |
plasmid pG135: | 164,963 bp | CP046258 |
REBASE acronym: Gsp135
Org_num: 37745
All begin GKZ92_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8540 | DUF222 domain-containing protein | |||
8545 | R | GamG2ORF22025P (97% identity) | Gsp135ORF8555P | |
8550 | S | S.Rsp46800ORF30361P (34% identity) | S.Gsp135ORF8555P | |
8555 | M | M.GamG2ORF22025P (96% identity) | M.Gsp135ORF8555P | |
8560 | 631 aa hypothetical protein | |||
plasmid pG135 | ||||
22885 | helix-turn-helix domain-containing protein | |||
22890 | R | PurYL1ORF12930P (92% identity) | Gsp135ORF22900P | |
22895 | S | S.Ssp04ORF15760P (71% identity) | S.Gsp135ORF22900P | |
22900 | M | M.Ssp04ORF15760P (90% identity) | M.Gsp135ORF22900P | |
22905 | tyrosine-type recombinase/integrase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2870 | glutamate--cysteine ligase | |||
2890 | M | M.Gsp4ORF2900P (100% identity) | M.Gsp135ORF2890P | |
2895 | restriction endonuclease | |||
3535 | 280 aa hypothetical protein | |||
3540 | M | M.Gsp4ORF3565P (90% identity) | M.Gsp135ORF3540P | |
3545 | HIT domain-containing protein | |||
11405 | methyltransferase domain-containing protein | |||
11410 | V | V.Mcr16369ORF22470P (66% identity) | V.Gsp135ORF11435P | |
11415 | DUF3883 domain-containing protein | |||
11420 | DNA helicase | |||
11425 | 468 aa hypothetical protein | |||
11430 | 216 aa hypothetical protein | |||
11435 | M | M.GspTK1ORF23170P (95% identity) | M.Gsp135ORF11435P | |
11440 | IS256 family transposase | |||
16825 | 390 aa hypothetical protein | |||
16830 | M | M.Ssp667ORF21445P (49% identity) | M.Gsp135ORF16830P | |
16840 | thioredoxin domain-containing protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pG135 | ||||
22985 | 194 aa hypothetical protein | |||
22990 | R | GspYORF3030P (53% identity) | Gsp135ORF22995P | |
22995 | M | M.Cri1114ORF8710P (36% identity) | M.Gsp135ORF22995P | |
23000 | 156 aa hypothetical protein |