Salmonella species HNK130 |
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Putative Salmonella species HNK130 RM systems
Ref: Zhang,L. et al. unpublished
REBASE ref # 29154
| Sequence length: | GenBank #: | |
| Chromosome: | 4,582,736 bp | CP046033 |
| plasmid pTHNK130-2: | 85,132 bp | CP046032 |
| plasmid unnamed: | 85,132 bp | CP046034 |
REBASE acronym: SenHNK130
Org_num: 36191
All begin GHT05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17115 | endoribonuclease SymE | |||
| 17120 | S | S.Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | S.SenHNK130ORF17125P |
| 17125 | M | M.Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | M.SenHNK130ORF17125P |
| 17130 | R | Esp17TGCORF18925P (99% identity) | AACNNNNNNGTGC | SenHNK130ORF17125P |
| 17135 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1180 | DUF4060 family protein | |||
| 1185 | M | M.Esp17TGCORF12725P (100% identity) | M.SenHNK130ORF1185P | |
| 1190 | DUF1317 family protein | |||
| 5120 | drug/metabolite exporter YedA | |||
| 5125 | V | V.SflFF64DcmP (100% identity) | V.SenHNK130DcmP | |
| 5130 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.SenHNK130DcmP |
| 5135 | phosphohydrolase | |||
| 11590 | DNA-binding transcriptional regulator Fis | |||
| 11595 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.SenHNK130ORF11595P |
| 11600 | DUF2556 domain-containing protein | |||
| 12215 | ribulose-phosphate 3-epimerase | |||
| 12220 | M | M.UbaC1152DamP (100% identity) | GATC | M.SenHNK130DamP |
| 12225 | cell division protein DamX | |||
| plasmid pTHNK130-2 | ||||
| 180 | 158 aa hypothetical protein | |||
| 185 | M | M.KpnHKP7E2ORF795P (100% identity) | M.SenHNK130ORF185P | |
| 190 | 100 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 23070 | 100 aa hypothetical protein | |||
| 23075 | M | M.KpnHKP7E2ORF795P (100% identity) | M.SenHNK130ORF185P | |
| 23080 | 158 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 645 | site-specific DNA recombinase | |||
| 650 | R | SsoSE61ORF22640P (100% identity) | YCGR | SenHNK130ORF650P |
| 655 | isocitrate dehydrogenase | |||
| 17100 | 906 aa hypothetical protein | |||
| 17105 | R | Esp17TGCMcrCP (100% identity) | SenHNK130McrCP | |
| 17110 | R | Msa17McrB2P (98% identity) | SenHNK130McrBP | |
| 17115 | endoribonuclease SymE | |||
| 17130 | type I restriction-modification system | |||
| 17135 | R | Esp17TGCMrrP (100% identity) | SenHNK130MrrP | |
| 17140 | GTPase | |||