Escherichia coli 1919D62 |
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Putative Escherichia coli 1919D62 RM systems
Ref: Yao,H. et al. unpublished
REBASE ref # 29101
| Sequence length: | GenBank #: | |
| Chromosome: | 4,669,207 bp | CP046009 |
| plasmid p1919D62-1: | 186,058 bp | CP046007 |
| plasmid p1919D62-2: | 114,129 bp | CP046008 |
REBASE acronym: Eco1919D62
Org_num: 36611
All begin GJD96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20915 | 128 aa hypothetical protein | |||
| 20920 | M | M.Eco41E2C05ORF19405P (100% identity) | M.Eco1919D62ORF20920P | |
| 20925 | S | S.EcoSTEC640ORF20915P (100% identity) | S.Eco1919D62ORF20920P | |
| 20930 | 433 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3355 | cell division protein DamX | |||
| 3360 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1919D62DamP |
| 3365 | ribulose-phosphate 3-epimerase | |||
| 3910 | DUF2556 domain-containing protein | |||
| 3915 | M | M.Eco3934ORF2315P (100% identity) | ATGCAT | M.Eco1919D62ORF3915P |
| 3920 | DNA-binding transcriptional regulator Fis | |||
| 10590 | phosphohydrolase | |||
| 10595 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco1919D62DcmP |
| 10600 | V | V.SsoSE61DcmP (100% identity) | V.Eco1919D62DcmP | |
| 10605 | drug/metabolite exporter YedA | |||
| 20895 | HNH endonuclease | |||
| 20900 | R | EcosB2CORFAP (100% identity) | Eco1919D62ORF20900P | |
| 20905 | AAA domain-containing protein | |||
| plasmid p1919D62-1 | ||||
| 525 | 273 aa hypothetical protein | |||
| 530 | M | M.Ype21801ORF197P (100% identity) | M.Eco1919D62ORF530P | |
| 535 | DNA-binding protein | |||
| 995 | nuclease | |||
| 1000 | M | M.Sen23ORF25130P (100% identity) | M.Eco1919D62ORF1000P | |
| 1005 | 56 aa hypothetical protein | |||
| plasmid p1919D62-2 | ||||
| 1420 | 318 aa hypothetical protein | |||
| 1425 | M | M.Ecosa7ORFDP (100% identity) | M.Eco1919D62ORF1425P | |
| 1430 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p1919D62-2 | ||||
| 1300 | recombinase RecA | |||
| 1305 | R | EcoHS301ORF23870P (100% identity) | Eco1919D62ORF1310P | |
| 1310 | M | M.EcoHS301ORF23870P (100% identity) | M.Eco1919D62ORF1310P | |
| 1315 | DUF4391 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20900 | HNH endonuclease | |||
| 20905 | R | SflN101McrBP (100% identity) | Eco1919D62McrBP | |
| 20910 | R | EcoSO63McrCP (100% identity) | Eco1919D62McrCP | |
| 20915 | 128 aa hypothetical protein | |||