Escherichia coli 1919D3 |
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Putative Escherichia coli 1919D3 RM systems
Ref: Yao,H. et al. unpublished
REBASE ref # 29101
| Sequence length: | GenBank #: | |
| Chromosome: | 4,710,181 bp | CP046006 |
| plasmid p1919D3-1: | 219,101 bp | CP046004 |
| plasmid p1919D3-2: | 95,543 bp | CP046005 |
REBASE acronym: Eco1919D3
Org_num: 36610
All begin GJD95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20785 | restriction endonuclease | |||
| 20790 | M | M.Esp9308ORFIP (79% identity) | M.Eco1919D3ORF20790P | |
| 20795 | IS3-like element IS3 family transposase | |||
| 20800 | S | S.EcoPSS12ORF22250P (68% identity) | S.Eco1919D3ORF20790P | |
| 20805 | R | EcoPSS12ORF22250P (99% identity) | Eco1919D3ORF20790P | |
| 20810 | endoribonuclease SymE | |||
| plasmid p1919D3-2 | ||||
| 1420 | 3-phosphatase | |||
| 1425 | R | EcoPSS13ORF44690P (99% identity) | Eco1919D3ORF1435P | |
| 1430 | S | S.Ero925ORF20445P (92% identity) | S.Eco1919D3ORF1435P | |
| 1435 | M | M.SenLY67ORF3575P (100% identity) | M.Eco1919D3ORF1435P | |
| 1440 | type II toxin-antitoxin system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3435 | cell division protein DamX | |||
| 3440 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1919D3DamP |
| 3445 | ribulose-phosphate 3-epimerase | |||
| 3990 | DUF2556 domain-containing protein | |||
| 3995 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco1919D3ORF3995P |
| 4000 | DNA-binding transcriptional regulator Fis | |||
| 10415 | phosphohydrolase | |||
| 10420 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco1919D3DcmP |
| 10425 | V | V.SflFF64DcmP (100% identity) | V.Eco1919D3DcmP | |
| 10430 | drug/metabolite exporter YedA | |||
| 16290 | replication endonuclease | |||
| 16295 | M | M.Eco5781ORF24105P (100% identity) | M.Eco1919D3ORF16295P | |
| 16300 | DUF2732 family protein | |||
| 20990 | HNH endonuclease | |||
| 20995 | RM | SenWT8IV (25% identity) | Eco1919D3ORF20995P | |
| 21000 | BREX-1 system phosphatase PglZ type A | |||
| plasmid p1919D3-1 | ||||
| 500 | 56 aa hypothetical protein | |||
| 505 | M | M.Sen23ORF25130P (100% identity) | M.Eco1919D3ORF505P | |
| 510 | nuclease | |||
| 970 | DNA-binding protein | |||
| 975 | M | M.Ype21801ORF197P (100% identity) | M.Eco1919D3ORF975P | |
| 980 | 273 aa hypothetical protein | |||
| plasmid p1919D3-2 | ||||
| 1325 | recombination-associated protein RdgC | |||
| 1330 | M | M.Eco655RtORF24550P (99% identity) | M.Eco1919D3ORF1330P | |
| 1340 | 156 aa hypothetical protein | |||