Escherichia coli 1916D6 |
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Putative Escherichia coli 1916D6 RM systems
Ref: Yao,H. et al. unpublished
REBASE ref # 29101
Complete sequence: 4,734,139 bp
GenBank #: CP046003
REBASE acronym: Eco6D6
Org_num: 36609
All begin GJD94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10420 | 410 aa hypothetical protein | |||
| 10425 | M | M.EcoYPE12ORF11395P (100% identity) | M.Eco6D6ORF10425P | |
| 10430 | S | S.EcoYPE12ORF11395P (100% identity) | S.Eco6D6ORF10425P | |
| 10435 | UPF0149 family protein | |||
| 10440 | cold-shock protein | |||
| 10445 | R | EcoYPE12ORF11395P (100% identity) | Eco6D6ORF10425P | |
| 10450 | DUF45 domain-containing protein | |||
| 20690 | IS3-like element IS2 family transposase | |||
| 20695 | M | M.EcoYPE3ORF20380P (100% identity) | M.Eco6D6ORF20695P | |
| 20700 | S | S.EcoYPE3ORF20380P (100% identity) | S.Eco6D6ORF20695P | |
| 20705 | R | EcoYPE3ORF20380P (100% identity) | Eco6D6ORF20695P | |
| 20715 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2445 | cell division protein DamX | |||
| 2450 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco6D6DamP |
| 2455 | ribulose-phosphate 3-epimerase | |||
| 3080 | DUF2556 domain-containing protein | |||
| 3085 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco6D6ORF3085P |
| 3090 | DNA-binding transcriptional regulator Fis | |||
| 10110 | phosphohydrolase | |||
| 10115 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco6D6DcmP |
| 10120 | V | V.SsoSE61DcmP (100% identity) | V.Eco6D6DcmP | |
| 10125 | drug/metabolite exporter YedA | |||
| 18575 | 379 aa hypothetical protein | |||
| 18580 | R | EcoTIF10ORFCP (100% identity) | Eco6D6ORF18585P | |
| 18585 | M | M.EcoYPE3ORF18250P (100% identity) | M.Eco6D6ORF18585P | |
| 18590 | 257 aa hypothetical protein | |||
| 20660 | HNH endonuclease | |||
| 20665 | R | SflFF17ORF19275P (100% identity) | Eco6D6ORF20665P | |
| 20670 | restriction endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20665 | HNH endonuclease | |||
| 20670 | R | EcoYPE3McrCP (100% identity) | Eco6D6McrCP | |
| 20675 | AAA domain-containing protein | |||
| 20670 | restriction endonuclease | |||
| 20675 | R | EcoYPE3McrBP (100% identity) | Eco6D6McrBP | |
| 20680 | DUF4942 domain-containing protein | |||