Salmonella enterica subsp. enterica serovar Blockley 159838 |
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Putative Salmonella enterica subsp. enterica serovar Blockley 159838 RM systems
Ref: Cohen,E. et al. Environ. Microbiol. (2019) In press
REBASE ref # 29153
Complete sequence: 4,903,781 bp
GenBank #: CP043662
REBASE acronym: Sen159838
Org_num: 36188
All begin F1B85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2555 | DUF91 domain-containing protein | |||
| 2560 | R | SenNCTR361ORF12935P (100% identity) | CCGANNNNNGTC | Sen159838ORF2570P |
| 2565 | S | S2.SenS50ORF19940P (100% identity) | CCGANNNNNGTC | S.Sen159838ORF2570P |
| 2570 | M | M.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | M.Sen159838ORF2570P |
| 2575 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10 | replication endonuclease | |||
| 15 | M | M.SspS13ORF1655P (100% identity) | M.Sen159838ORF15P | |
| 20 | R | SspS13ORF1655P (100% identity) | Sen159838ORF15P | |
| 25 | DUF262 domain-containing protein | |||
| 2400 | IS256 family transposase | |||
| 2405 | R | SenNCTR361ORF12755P (91% identity) | CCWWGG | Sen159838ORF2410P |
| 2410 | M | M.SenNCTR361ORF12755P (100% identity) | CCWWGG | M.Sen159838ORF2410P |
| 2415 | 121 aa hypothetical protein | |||
| 2430 | RES family NAD+ phosphorylase | |||
| 2435 | R | Sen6385ORF4589P (100% identity) | Sen159838ORF2435P | |
| 2440 | YebC/PmpR family DNA-binding transcriptional | |||
| 13380 | drug/metabolite exporter YedA | |||
| 13385 | V | very short patch repair endonuclease | V.Sen159838DcmP | |
| 13390 | M | M.Sens8813DcmP (100% identity) | CCWGG | M.Sen159838DcmP |
| 13395 | phosphohydrolase | |||
| 17210 | replication endonuclease | |||
| 17215 | M | M.EcoKG8ORF22505P (99% identity) | GATC | M.Sen159838ORF17215P |
| 17220 | TraR/DksA family transcriptional regulator | |||
| 20520 | DNA-binding transcriptional regulator Fis | |||
| 20525 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen159838ORF20525P |
| 20530 | DUF2556 domain-containing protein | |||
| 21005 | ribulose-phosphate 3-epimerase | |||
| 21010 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen159838DamP |
| 21015 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4800 | MFS transporter | |||
| 4805 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen159838ORF4805P |
| 4810 | R | SenNCTR361ORF2010P (100% identity) | CAGAG | Sen159838ORF4805P |
| 4815 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2570 | type I restriction-modification system subunit | |||
| ??? | R | SenN1660Mrr2P (100% identity) | Sen159838MrrP | |
| 2580 | N-6 DNA methylase | |||
| 2570 | type I restriction-modification system subunit | |||
| 2575 | R | Sens29927MrrP (100% identity) | Sen159838Mrr2P | |
| 2580 | N-6 DNA methylase | |||