Salmonella enterica subsp. enterica serovar Kentucky 161365 |
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Putative Salmonella enterica subsp. enterica serovar Kentucky 161365 RM systems
Ref: Cohen,E. et al. Environ. Microbiol. (2019) In press
REBASE ref # 29153
Complete sequence: 4,889,798 bp
GenBank #: CP043664
REBASE acronym: Sen161365
Org_num: 36189
All begin F1B86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20355 | 322 aa hypothetical protein | |||
| 20360 | R | SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | Sen161365ORF20365P |
| 20365 | M | M.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | M.Sen161365ORF20365P |
| 20370 | S | S.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | S.Sen161365ORF20365P |
| 20375 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1935 | cell division protein DamX | |||
| 1940 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen161365DamP |
| 1945 | ribulose-phosphate 3-epimerase | |||
| 2420 | DUF2556 domain-containing protein | |||
| 2425 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen161365ORF2425P |
| 2430 | tyrosine-type recombinase/integrase | |||
| 3435 | DUF2732 family protein | |||
| 3440 | M | M.SenUA39ORF1528P (100% identity) | M.Sen161365ORF3440P | |
| 3445 | replication endonuclease | |||
| 5990 | 146 aa hypothetical protein | |||
| 5995 | M | M.SenS38AORF18010P (100% identity) | M.Sen161365ORF5995P | |
| 6000 | 104 aa hypothetical protein | |||
| 6030 | GntR family transcriptional regulator | |||
| 6035 | M | M.SenCS16ORFGP (100% identity) | M.Sen161365ORF6035P | |
| 6040 | DNA cytosine methyltransferase | |||
| 6035 | phage N-6-adenine-methyltransferase | |||
| 6040 | M | M.SenL15ORF5555P (100% identity) | M.Sen161365ORF6040P | |
| 6045 | RusA family crossover junction | |||
| 10030 | phosphohydrolase | |||
| 10035 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen161365DcmP |
| 10040 | V | very short patch repair endonuclease | V.Sen161365DcmP | |
| 10045 | drug/metabolite exporter YedA | |||
| 20495 | YebC/PmpR family DNA-binding transcriptional | |||
| 20500 | R | SspA292ORF20185P (100% identity) | Sen161365ORF20500P | |
| 20505 | malate transporter | |||
| 20535 | BREX system P-loop protein BrxC | |||
| 20540 | RM | SspA292ORF20215P (100% identity) | GAANCAG | Sen161365ORF20540P |
| 20545 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17955 | 33 aa hypothetical protein | |||
| 17960 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen161365ORF17965P |
| 17965 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.Sen161365ORF17965P |
| 17970 | MFS transporter | |||