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Putative Salmonella enterica subsp. enterica serovar Typhimurium AUSMDU00008979 RM systems
Ref: Baines,S.L. et al. unpublished
REBASE ref # 29032
Sequence length: | GenBank #: | |
Chromosome: | 5,022,086 bp | CP045952 |
plasmid pAUSMDU00008979_01: | 144,821 bp | CP045953 |
REBASE acronym: Sen8979
Org_num: 35727
All begin GJE10_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21435 | restriction endonuclease | |||
21440 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen8979ORF21445P |
21445 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen8979ORF21445P |
21450 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen8979ORF21445P |
21455 | IS3 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1840 | cell division protein DamX | |||
1845 | M | M.StyTDamP (100% identity) | GATC | M.Sen8979DamP |
1850 | ribulose-phosphate 3-epimerase | |||
2340 | DUF2556 domain-containing protein | |||
2345 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8979ORF2345P |
2350 | DNA-binding transcriptional regulator Fis | |||
3265 | DUF2732 family protein | |||
3270 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen8979ORF3270P | |
3275 | replication endonuclease | |||
6345 | ead/Ea22-like family protein | |||
6350 | M | M.StyTORF1914P (100% identity) | M.Sen8979ORF6350P | |
6355 | 92 aa hypothetical protein | |||
10065 | PerC family transcriptional regulator | |||
10070 | M | M.Ssp17155ORFIP (100% identity) | M.Sen8979ORF10070P | |
10075 | RusA family crossover junction | |||
10340 | phosphohydrolase | |||
10345 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen8979DcmP |
10350 | V | V.StyUK1DcmP (100% identity) | V.Sen8979DcmP | |
10355 | drug/metabolite exporter YedA | |||
21605 | BREX system P-loop protein BrxC | |||
21610 | RM | StyUK1IV (100% identity) | GATCAG | Sen8979ORF21610P |
21615 | AAA family ATPase | |||
plasmid pAUSMDU00008979_01 | ||||
25620 | 102 aa hypothetical protein | |||
25625 | M | M.SenST46ORF25580P (100% identity) | M.Sen8979ORF25625P | |
25630 | 73 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18820 | 33 aa hypothetical protein | |||
18825 | R | StyUK1IP (99% identity) | CAGAG | Sen8979ORF18830P |
18830 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen8979ORF18830P |
18835 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21430 | BrnT family toxin | |||
21435 | R | StyUK1MrrP (100% identity) | Sen8979MrrP | |
21440 | type I restriction-modification system |