Xanthomonas oryzae pv. oryzae LN18 |
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Putative Xanthomonas oryzae pv. oryzae LN18 RM systems
Ref: Xu,Z. et al. Mol Plant 12 (11), 1434-1446 (2019)
REBASE ref # 29528
Complete sequence: 5,024,861 bp
GenBank #: CP045238
REBASE acronym: XorLN18
Org_num: 37368
All begin FDU21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7115 | 65 aa hypothetical protein | |||
| 7120 | R | XorK2ORFEP (98% identity) | XorLN18ORF7155P | |
| 7125 | 221 aa hypothetical protein | |||
| 7130 | 246 aa hypothetical protein | |||
| 7135 | restriction endonuclease subunit S | |||
| ??? | S | S.XorKORF3457P (80% identity) | S.XorLN18ORF7155P | |
| 7150 | 144 aa hypothetical protein | |||
| ??? | M | M.XorYcbORF17970P (91% identity) | M.XorLN18ORF7155P | |
| 7160 | restriction endonuclease | |||
| 7170 | 87 aa hypothetical protein | |||
| 7175 | R | XorK2ORFFP (99% identity) | XorLN18ORF7185P | |
| 7180 | Abi family protein | |||
| 7185 | M | M.XorKORF3462P (99% identity) | M.XorLN18ORF7185P | |
| ??? | S | S.Xor89031ORFDP (98% identity) | S.XorLN18ORF7185P | |
| 7205 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9890 | tail-specific protease | |||
| 9895 | R | XorZ173ORF3935P (62% identity) | CTGCAG | XorLN18ORF9900P |
| 9900 | M | M.XorZ173ORF3935P (98% identity) | CTGCAG | M.XorLN18ORF9900P |
| 9905 | lipoyl synthase | |||
| 16720 | MobC family plasmid mobilization relaxosome | |||
| 16725 | V | V.XorPXO61ORF3170P (86% identity) | V.XorLN18ORF16730P | |
| 16730 | M | M.XorPX061ORFBP (96% identity) | CGATCG | M.XorLN18ORF16730P |
| 16735 | R | XorYNJCORF16920P (98% identity) | CGATCG | XorLN18ORF16730P |
| 16740 | integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11260 | Fic family protein | |||
| 11265 | M | M.XorZ173ORF2630P (99% identity) | CCGAGG | M.XorLN18ORF11265P |
| 11270 | R | XorYN24ORF9770P (99% identity) | CCGAGG | XorLN18ORF11265P |
| 11275 | alpha/beta fold hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7155 | SAM-dependent DNA methyltransferase | |||
| 7160 | R | XorZ173MrrP (93% identity) | XorLN18MrrP | |
| 7165 | type II toxin-antitoxin system RelE/ParE family | |||