Thermochromatium tepidum ATCC 43061 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Thermochromatium tepidum ATCC 43061 RM systems
Ref: Sattley,W.M. et al. unpublished
REBASE ref # 30067
Complete sequence: 2,958,290 bp
GenBank #: CP039268
REBASE acronym: Tte43061
Org_num: 38970
All begin E6P07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5250 | helix-turn-helix domain-containing protein | |||
| 5255 | M | M.McaTIV (94% identity) | M.Tte43061ORF5255P | |
| 5260 | S | S.Bba10ORF16890P (60% identity) | S.Tte43061ORF5255P | |
| 5265 | killer suppression protein HigA | |||
| 5270 | HigA family addiction module antidote protein | |||
| 5275 | R | McaKN2ORF11595P (94% identity) | Tte43061ORF5255P | |
| 5280 | 50 aa hypothetical protein | |||
| 10885 | insulinase family protein | |||
| 10890 | R | Tte43061ORFAP (98% identity) | Tte43061ORF10920P | |
| 10895 | transposase | |||
| 10900 | 331 aa hypothetical protein | |||
| 10905 | S | S.Tte43061ORFAP (100% identity) | S.Tte43061ORF10920P | |
| 10910 | Fic family protein | |||
| 10915 | AAA family ATPase | |||
| 10920 | M | M.Tte43061ORFAP (100% identity) | M.Tte43061ORF10920P | |
| 10925 | signal recognition particle-docking protein | |||
| 10885 | insulinase family protein | |||
| ??? | R | Tte43061ORF10920P (98% identity) | Tte43061ORFAP | |
| 10895 | transposase | |||
| 10900 | 331 aa hypothetical protein | |||
| 10905 | S | S.Tte43061ORF10920P (100% identity) | S.Tte43061ORFAP | |
| 10910 | Fic family protein | |||
| 10915 | AAA family ATPase | |||
| 10920 | M | M.Tte43061ORF10920P (100% identity) | M.Tte43061ORFAP | |
| 10925 | signal recognition particle-docking protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5230 | tyrosine-type recombinase/integrase | |||
| 5235 | M | M.McaMIRORF10830P (85% identity) | M.Tte43061ORF5235P | |
| 5240 | DUF87 domain-containing protein | |||
| 6650 | 3-isopropylmalate dehydrogenase | |||
| 6655 | M | M.AteNZORF19650P (90% identity) | M.Tte43061ORF6655P | |
| 6660 | 3-isopropylmalate dehydratase small subunit | |||
| 7045 | nucleotidyltransferase domain-containing | |||
| 7050 | M | M.MtaRPORF13815P (57% identity) | M.Tte43061ORF7050P | |
| 7055 | four helix bundle protein | |||
| 7860 | 200 aa hypothetical protein | |||
| 7865 | R | GprBW2ORF12835P (13% identity) | Tte43061ORF7870P | |
| 7870 | M | M.GprSS5ORF3415P (35% identity) | M.Tte43061ORF7870P | |
| 7875 | helicase | |||
| 7875 | helicase | |||
| 7880 | M | M.Sth15264ORF7525P (86% identity) | M.Tte43061ORF7880P | |
| 7885 | PIN domain-containing protein | |||
| 12865 | DUF499 domain-containing protein | |||
| 12870 | M | M.Tte43061ORFBP (99% identity) | M.Tte43061ORF12870P | |
| 12875 | DUF3883 domain-containing protein | |||
| 12865 | DUF499 domain-containing protein | |||
| ??? | M | M.Tte43061ORF12870P (99% identity) | M.Tte43061ORFBP | |
| 12875 | DUF3883 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7575 | Fe-S cluster protein | |||
| 7580 | M | M1.Tte43061ORF8310P (30% identity) | M.Tte43061ORF7580P | |
| 7585 | R | EspMSP2ORF2010P (50% identity) | Tte43061ORF7580P | |
| 7590 | 284 aa hypothetical protein | |||
| 8275 | tetratricopeptide repeat protein | |||
| 8280 | R | CteTORF1729P (88% identity) | Tte43061ORF8310P | |
| 8285 | DUF2283 domain-containing protein | |||
| 8290 | DUF4258 domain-containing protein | |||
| 8295 | type III restriction endonuclease subunit R | |||
| 8300 | DUF86 domain-containing protein | |||
| 8305 | nucleotidyltransferase | |||
| 8310 | M | M.SynJA3ORF1313P (42% identity) | M2.Tte43061ORF8310P | |
| 8315 | M | M.Tte43061ORF7580P (30% identity) | M1.Tte43061ORF8310P | |
| 8320 | DNA polymerase III subunit delta | |||