Shigella dysenteriae CFSAN029786 |
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Putative Shigella dysenteriae CFSAN029786 RM systems
Ref: Mafiz,A. et al. unpublished
REBASE ref # 29023
Complete sequence: 4,716,545 bp
GenBank #: CP045784
REBASE acronym: Sdy29786
Org_num: 36536
All begin GH770_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6805 | IS3 family transposase | |||
| 6810 | R | Sso30807IP (100% identity) | GGANNNNNNCTTT | Sdy29786ORF6815P |
| 6815 | M | M.Sso30807I (100% identity) | GGANNNNNNCTTT | M.Sdy29786ORF6815P |
| 6820 | S | S.Sso30807I (100% identity) | GGANNNNNNCTTT | S.Sdy29786ORF6815P |
| 6825 | 238 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2070 | replication endonuclease | |||
| 2075 | M | M.Sso30807ORF12365P (100% identity) | M.Sdy29786ORF2075P | |
| 2080 | IS3 family transposase | |||
| 4900 | LexA family transcriptional regulator | |||
| 4905 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sdy29786ORF4905P |
| 4910 | PerC family transcriptional regulator | |||
| 11785 | cell division protein DamX | |||
| 11790 | M | M.Sso30807DamP (100% identity) | GATC | M.Sdy29786DamP |
| 11795 | ribulose-phosphate 3-epimerase | |||
| 12360 | DUF2556 domain-containing protein | |||
| 12365 | M | M.Sso30807ORF1465P (100% identity) | ATGCAT | M.Sdy29786ORF12365P |
| 12370 | DNA-binding transcriptional regulator Fis | |||
| 18095 | TrmB family transcriptional regulator | |||
| 18100 | M | M.Sso30807ORF21255P (100% identity) | A | M.Sdy29786ORF19895P |
| 18120 | DUF1737 domain-containing protein | |||
| 19340 | phosphohydrolase | |||
| 19345 | M | M.Sso30807Dcm (100% identity) | CCWGG | M.Sdy29786DcmP |
| 19350 | V | V.SsoST152DcmP (100% identity) | V.Sdy29786DcmP | |
| 19355 | drug/metabolite exporter YedA | |||
| 19860 | PerC family transcriptional regulator | |||
| 19865 | M | M.Sso30807ORF19320P (100% identity) | GATC | M.Sdy29786ORF19865P |
| 19870 | RusA family crossover junction | |||
| 23535 | DUF3927 domain-containing protein | |||
| 23550 | M | M.Sdy12037ORFEP (99% identity) | A | M.Sdy29786ORF23550P |
| 23555 | TrmB family transcriptional regulator | |||