Salmonella enterica subsp. enterica serovar Muenchen LG24 |
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Putative Salmonella enterica subsp. enterica serovar Muenchen LG24 RM systems
Ref: Tran,T.D. et al. unpublished
REBASE ref # 28986
| Sequence length: | GenBank #: | |
| Chromosome: | 4,930,424 bp | CP045056 |
| plasmid pLG24p2: | 270,881 bp | CP045054 |
REBASE acronym: SenLG24
Org_num: 35565
All begin SMLG24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pLG24p2 | ||||
| 1635 | recombinase family protein | |||
| 1640 | M | M.SenLG26II (100% identity) | GACNNNNNNRTTC | M.SenLG24II |
| 1645 | S | S.SenLG26II (100% identity) | GACNNNNNNRTTC | S.SenLG24II |
| 1650 | R | SenLG26IIP (100% identity) | GACNNNNNNRTTC | SenLG24IIP |
| 1655 | ISL3-like element ISKpn25 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11365 | 140 aa hypothetical protein | |||
| 11370 | M | M.SenLG26ORF11390P (100% identity) | M.SenLG24ORF11370P | |
| 11375 | ead/Ea22-like family protein | |||
| 12435 | drug/metabolite exporter YedA | |||
| 12440 | V | V.StyUK1DcmP (100% identity) | V.SenLG24DcmP | |
| 12445 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenLG24DcmP |
| 12450 | phosphohydrolase | |||
| 20065 | DNA-binding transcriptional regulator Fis | |||
| 20070 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLG24ORF20070P |
| 20075 | DUF2556 domain-containing protein | |||
| 20550 | ribulose-phosphate 3-epimerase | |||
| 20555 | M | M.StyTDamP (100% identity) | GATC | M.SenLG24DamP |
| 20560 | cell division protein DamX | |||
| 23430 | 70 aa hypothetical protein | |||
| 23435 | M | M.SenS1655ORF23670P (100% identity) | M1.SenLG24ORF23435P | |
| 23440 | 65 aa hypothetical protein | |||
| 23445 | M | M1.SenS1655ORF23660P (100% identity) | M2.SenLG24ORF23435P | |
| 23450 | replication endonuclease | |||
| 25730 | DUF4102 domain-containing protein | |||
| 25735 | M | M.Ssp6947ORF4185P (100% identity) | TCCGGA | M.SenLG24ORF25735P |
| 25740 | R | Ssp6947ORF4185P (100% identity) | SenLG24ORF25735P | |
| 25745 | 96 aa hypothetical protein | |||
| 25805 | helix-turn-helix domain-containing protein | |||
| 25810 | R | Ssp6947ORF4170P (100% identity) | SenLG24ORF25810P | |
| 25815 | YebC/PmpR family DNA-binding transcriptional | |||
| plasmid pLG24p2 | ||||
| 1205 | 63 aa hypothetical protein | |||
| 1210 | M | M.SenLG26ORF1225P (100% identity) | M.SenLG24ORF1210P | |
| 1215 | DUF1380 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3875 | MFS transporter | |||
| 3880 | M | M.SspZ69ORF17325P (100% identity) | CAGAG | M.SenLG24I |
| 3885 | R | Sens29871ORF18450P (100% identity) | CAGAG | SenLG24IP |
| 3890 | 33 aa hypothetical protein | |||