Ref: Baines,S.L. et al. unpublished

REBASE ref # 29032

Complete sequence: 2,174,817 bp

GenBank #: CP045832

REBASE acronym: Ngo10541

Org_num: 38412

 

All begin GIJ09_

Type I
ORF Gene Most similar Specificity Name
 
2520 ADP-glyceromanno-heptose 6-epimerase
2525 M M.NgoJH7ORFLP (100% identity) M.Ngo10541ORF2525P
2530 DNA damage-inducible protein D
2535 S S1.NgoAT159ORF7305P (100% identity) GCANNNNNNNNTGC S2.Ngo10541ORF2525P
2540 S S1.NgoJH4ORFGP (100% identity) S3.Ngo10541ORF2525P
2545 R NgoAT159ORF7305P (100% identity) Ngo10541ORF2525P
2550 ATP-dependent Clp protease ATP-binding subunit
 
5770 ABC transporter
5775 M M.NgoWSI (100% identity) GAGNNNNNTAC M.Ngo10541ORF5775P
5780 280 aa hypothetical protein
5785 186 aa hypothetical protein
5790 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo10541ORF5775P
5795 hydroxyacid dehydrogenase
5800 R NgoWPIP (100% identity) GAGNNNNNTAC Ngo10541ORF5775P
5805 AAA family ATPase
Type II
ORF Gene Most similar Specificity Name
 
30 leucine--tRNA ligase
35 R NgoWSORF8P (100% identity) GATC Ngo10541ORF35P
40 DNA adenine methylase
 
40 DNA adenine methylase
??? M M.NgoWPORF8P (100% identity) M.Ngo10541ORF45P
55 184 aa hypothetical protein
 
1310 transposase
1315 M M.NgoWSORF259P (100% identity) CCGCGG M.Ngo10541ORF1315P
1320 R NgoWSORF259P (100% identity) CCGCGG Ngo10541ORF1315P
1325 excinuclease ABC subunit UvrA
 
1960 phenylalanine--tRNA ligase subunit alpha
1965 V V.NgoWSORF391P (100% identity) V.Ngo10541ORFAP
??? M M.NgoWSORF391P (100% identity) M.Ngo10541ORFAP
1980 R NgoWSORF391P (100% identity) Ngo10541ORFAP
1985 phenylalanine--tRNA ligase subunit beta
 
2270 IS1595 family transposase
2275 RM NgoWSORF450P (100% identity) GACNNNNNTGA Ngo10541ORF2275P
2280 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.Ngo10541ORF2275P
2285 141 aa hypothetical protein
 
2305 uroporphyrinogen decarboxylase
2310 H H.NgoWSORF459P (100% identity) H.Ngo10541ORF2320P
2315 R NgoWSORF459P (100% identity) GCSGC Ngo10541ORF2320P
2320 M M.NgoWSORF459P (100% identity) GCSGC M.Ngo10541ORF2320P
2325 75 aa hypothetical protein
 
4845 5-(carboxyamino)imidazole ribonucleotide
4850 R NgoWSORF1056P (100% identity) GCCGGC Ngo10541ORF4855P
4855 M M.NgoWLORF1156P (100% identity) GCCGGC M.Ngo10541ORF4855P
4860 anthranilate synthase component I
 
5895 3-isopropylmalate dehydratase small subunit
5900 M M.NmeM395ORFKP (100% identity) GGNNCC M.Ngo10541ORF5900P
5905 R NgoWPORF778P (100% identity) GGNNCC Ngo10541ORF5900P
5910 3-isopropylmalate dehydrogenase
 
8595 replication initiation factor
8600 V V.NgoWSORF1801P (100% identity) V.Ngo10541ORF8610P
8605 R Ngos1291ORF65P (100% identity) Ngo10541ORF8610P
??? M M.NgoSH240ORFLP (100% identity) M.Ngo10541ORF8610P
8620 48 aa hypothetical protein
 
9835 cysteine--tRNA ligase
9840 R NgoWSORF2052P (100% identity) RGCGCY Ngo10541ORF9845P
9845 M M.NgoWSORF2052P (100% identity) RGCGCY M.Ngo10541ORF9845P
9850 GTPase ObgE
 
10395 S1 RNA-binding domain-containing protein
10400 M M2.Ngos1291ORF4080P (100% identity) GGTGA M1.Ngo10541ORF10400P
10405 M M2.NgoWSIII (100% identity) GGTGA M2.Ngo10541ORF10400P
10410 R NgoWSIIIP (100% identity) GGTGA Ngo10541ORF10400P
10415 93 aa hypothetical protein
 
11000 ribosome recycling factor
11005 M M.NgoPII (100% identity) GGCC M.Ngo10541ORF11005P
11010 R NgoWSORF2276P (100% identity) GGCC Ngo10541ORF11005P
11015 FUSC family protein
Type III
ORF Gene Most similar Specificity Name
 
6080 tRNA pseudouridine(55) synthase TruB
6085 M M.NgoWNIV (96% identity) GCAGA M.Ngo10541ORF6085P
6090 R NgoWPORF742P (100% identity) GCAGA Ngo10541ORF6085P
6095 L-lactate dehydrogenase
 
6560 tRNA 2-thiocytidine(32) synthetase TtcA
6565 R NgoWPIIP (100% identity) CCACC Ngo10541ORF6570P
6570 M M.NgoFQ20ORF3215P (99% identity) CCACC M.Ngo10541ORF6570P
6575 peptidyl-prolyl cis-trans isomerase