Neisseria gonorrhoeae AUSMDU00010541 |
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Putative Neisseria gonorrhoeae AUSMDU00010541 RM systems
Ref: Baines,S.L. et al. unpublished
REBASE ref # 29032
Complete sequence: 2,174,817 bp
GenBank #: CP045832
REBASE acronym: Ngo10541
Org_num: 38412
All begin GIJ09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2520 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2525 | M | M.NgoJH7ORFLP (100% identity) | M.Ngo10541ORF2525P | |
| 2530 | DNA damage-inducible protein D | |||
| 2535 | S | S1.NgoAT159ORF7305P (100% identity) | GCANNNNNNNNTGC | S2.Ngo10541ORF2525P |
| 2540 | S | S1.NgoJH4ORFGP (100% identity) | S3.Ngo10541ORF2525P | |
| 2545 | R | NgoAT159ORF7305P (100% identity) | Ngo10541ORF2525P | |
| 2550 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5770 | ABC transporter | |||
| 5775 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo10541ORF5775P |
| 5780 | 280 aa hypothetical protein | |||
| 5785 | 186 aa hypothetical protein | |||
| 5790 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo10541ORF5775P |
| 5795 | hydroxyacid dehydrogenase | |||
| 5800 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | Ngo10541ORF5775P |
| 5805 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10541ORF35P |
| 40 | DNA adenine methylase | |||
| 40 | DNA adenine methylase | |||
| ??? | M | M.NgoWPORF8P (100% identity) | M.Ngo10541ORF45P | |
| 55 | 184 aa hypothetical protein | |||
| 1310 | transposase | |||
| 1315 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo10541ORF1315P |
| 1320 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo10541ORF1315P |
| 1325 | excinuclease ABC subunit UvrA | |||
| 1960 | phenylalanine--tRNA ligase subunit alpha | |||
| 1965 | V | V.NgoWSORF391P (100% identity) | V.Ngo10541ORFAP | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo10541ORFAP | |
| 1980 | R | NgoWSORF391P (100% identity) | Ngo10541ORFAP | |
| 1985 | phenylalanine--tRNA ligase subunit beta | |||
| 2270 | IS1595 family transposase | |||
| 2275 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo10541ORF2275P |
| 2280 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo10541ORF2275P |
| 2285 | 141 aa hypothetical protein | |||
| 2305 | uroporphyrinogen decarboxylase | |||
| 2310 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10541ORF2320P | |
| 2315 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10541ORF2320P |
| 2320 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10541ORF2320P |
| 2325 | 75 aa hypothetical protein | |||
| 4845 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4850 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo10541ORF4855P |
| 4855 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10541ORF4855P |
| 4860 | anthranilate synthase component I | |||
| 5895 | 3-isopropylmalate dehydratase small subunit | |||
| 5900 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10541ORF5900P |
| 5905 | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo10541ORF5900P |
| 5910 | 3-isopropylmalate dehydrogenase | |||
| 8595 | replication initiation factor | |||
| 8600 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10541ORF8610P | |
| 8605 | R | Ngos1291ORF65P (100% identity) | Ngo10541ORF8610P | |
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo10541ORF8610P | |
| 8620 | 48 aa hypothetical protein | |||
| 9835 | cysteine--tRNA ligase | |||
| 9840 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10541ORF9845P |
| 9845 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10541ORF9845P |
| 9850 | GTPase ObgE | |||
| 10395 | S1 RNA-binding domain-containing protein | |||
| 10400 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo10541ORF10400P |
| 10405 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo10541ORF10400P |
| 10410 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10541ORF10400P |
| 10415 | 93 aa hypothetical protein | |||
| 11000 | ribosome recycling factor | |||
| 11005 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo10541ORF11005P |
| 11010 | R | NgoWSORF2276P (100% identity) | GGCC | Ngo10541ORF11005P |
| 11015 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6080 | tRNA pseudouridine(55) synthase TruB | |||
| 6085 | M | M.Ngos1291ORF8930P (80% identity) | GCAGA | M.Ngo10541ORF6085P |
| 6090 | R | NgoWPORF742P (100% identity) | GCAGA | Ngo10541ORF6085P |
| 6095 | L-lactate dehydrogenase | |||
| 6560 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6565 | R | NgoWPIIP (100% identity) | CCACC | Ngo10541ORF6570P |
| 6570 | M | M.NgoFQ20ORF3215P (99% identity) | CCACC | M.Ngo10541ORF6570P |
| 6575 | peptidyl-prolyl cis-trans isomerase | |||