Salmonella enterica subsp. enterica serovar Typhimurium SO21 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SO21 RM systems
Ref: Vinuesa,P. et al. unpublished
REBASE ref # 29042
| Sequence length: | GenBank #: | |
| Chromosome: | 4,764,173 bp | CP032494 |
| plasmid pSO21_118: | 118,265 bp | CP032495 |
| plasmid pSO21_75: | 74,729 bp | CP032497 |
| plasmid pSO21_ColRNAI_6.8: | 6,841 bp | CP032498 |
REBASE acronym: SenSO21
Org_num: 35732
All begin D5069_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22870 | endoribonuclease SymE | |||
| 22875 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSO21ORF22880P |
| 22880 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenSO21ORF22880P |
| 22885 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSO21ORF22880P |
| 22890 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10430 | drug/metabolite exporter YedA | |||
| 10435 | V | V.StyUK1DcmP (100% identity) | V.SenSO21DcmP | |
| 10440 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenSO21DcmP |
| 10445 | phosphohydrolase | |||
| 17085 | DNA-binding transcriptional regulator Fis | |||
| 17090 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSO21ORF17090P |
| 17095 | DUF2556 domain-containing protein | |||
| 17580 | ribulose-phosphate 3-epimerase | |||
| 17585 | M | M.StyTDamP (100% identity) | GATC | M.SenSO21DamP |
| 17590 | cell division protein DamX | |||
| 22720 | ATP-binding protein | |||
| 22725 | RM | StyUK1IV (100% identity) | GATCAG | SenSO21ORF22725P |
| 22730 | BREX system P-loop protein BrxC | |||
| plasmid pSO21_118 | ||||
| 23545 | 102 aa hypothetical protein | |||
| 23550 | M | M.StyR64ORFAP (100% identity) | M.SenSO21ORF23550P | |
| 23555 | 73 aa hypothetical protein | |||
| plasmid pSO21_75 | ||||
| 24885 | 226 aa hypothetical protein | |||
| 24890 | M | M.SenYU39ORF5083P (100% identity) | M.SenSO21ORF24890P | |
| 24895 | glutamine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | MFS transporter | |||
| 1815 | M | M.StyUK1I (100% identity) | CAGAG | M.SenSO21ORF1815P |
| 1820 | R | StyUK1IP (99% identity) | CAGAG | SenSO21ORF1815P |
| 1825 | 33 aa hypothetical protein | |||
| plasmid pSO21_ColRNAI_6.8 | ||||
| 25165 | Rop family plasmid primer RNA-binding protein | |||
| 25170 | M | M.Sen1120ORF3P (99% identity) | M.SenSO21ORF25170P | |
| 25175 | R | SenS089ORF25085P (100% identity) | SenSO21ORF25170P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22885 | type I restriction-modification system | |||
| 22890 | R | StyUK1MrrP (100% identity) | SenSO21MrrP | |
| 22895 | BrnT family toxin | |||