Salmonella enterica subsp. enterica serovar Typhimurium SL26 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SL26 RM systems
Ref: Vinuesa,P. et al. unpublished
REBASE ref # 29042
| Sequence length: | GenBank #: | |
| Chromosome: | 4,837,346 bp | CP032490 |
| plasmid pSL26_91: | 90,686 bp | CP032492 |
| plasmid pSL26_ColRNAI: | 4,315 bp | CP032493 |
| plasmid pSL26_IncA/C2: | 164,229 bp | CP032491 |
REBASE acronym: SenSL26
Org_num: 35731
All begin D5068_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23430 | endoribonuclease SymE | |||
| 23435 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSL26ORF23440P |
| 23440 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenSL26ORF23440P |
| 23445 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSL26ORF23440P |
| 23450 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9470 | disulfide bond formation protein DsbB | |||
| 9475 | M | M.SenYU39ORF1896P (100% identity) | M.SenSL26ORF9475P | |
| 9480 | Com family DNA-binding transcriptional | |||
| 10685 | drug/metabolite exporter YedA | |||
| 10690 | V | V.StyUK1DcmP (100% identity) | V.SenSL26DcmP | |
| 10695 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenSL26DcmP |
| 10700 | phosphohydrolase | |||
| 13900 | ribosome-associated translation inhibitor RaiA | |||
| 13905 | M | M.SenYU39ORF1896P (100% identity) | M.SenSL26ORF13905P | |
| 13910 | Com family DNA-binding transcriptional | |||
| 17645 | DNA-binding transcriptional regulator Fis | |||
| 17650 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSL26ORF17650P |
| 17655 | DUF2556 domain-containing protein | |||
| 18140 | ribulose-phosphate 3-epimerase | |||
| 18145 | M | M.StyTDamP (100% identity) | GATC | M.SenSL26DamP |
| 18150 | cell division protein DamX | |||
| 23280 | ATP-binding protein | |||
| 23285 | RM | StyUK1IV (100% identity) | GATCAG | SenSL26ORF23285P |
| 23290 | BREX system P-loop protein BrxC | |||
| plasmid pSL26_91 | ||||
| 25180 | glutamine--tRNA ligase | |||
| 25185 | M | M.SenYU39ORF5083P (100% identity) | M.SenSL26ORF25185P | |
| 25190 | 226 aa hypothetical protein | |||
| plasmid pSL26_ColRNAI | ||||
| 25455 | 59 aa hypothetical protein | |||
| 25460 | M | M.EcoVIII (100% identity) | AAGCTT | M.SenSL26ORF25460P |
| 25465 | R | EcoVIII (100% identity) | AAGCTT | SenSL26ORF25460P |
| plasmid pSL26_IncA/C2 | ||||
| 24310 | 100 aa hypothetical protein | |||
| 24315 | M | M.YrupYR1ORFCP (100% identity) | M.SenSL26ORF24315P | |
| 24320 | 158 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2155 | MFS transporter | |||
| 2160 | M | M.StyUK1I (100% identity) | CAGAG | M.SenSL26ORF2160P |
| 2165 | R | StyUK1IP (99% identity) | CAGAG | SenSL26ORF2160P |
| 2170 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23445 | type I restriction-modification system | |||
| 23450 | R | StyUK1MrrP (100% identity) | SenSL26MrrP | |
| 23455 | BrnT family toxin | |||