Methylospira mobilis Shm1 |
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Putative Methylospira mobilis Shm1 RM systems
Ref: Oshkin,I.Y. et al. unpublished
REBASE ref # 29852
Complete sequence: 4,703,534 bp
GenBank #: CP044205
REBASE acronym: MmoShm1
Org_num: 38306
All begin F6R98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2935 | 198 aa hypothetical protein | |||
| 2940 | S | S.MmoSPMXORF9225P (70% identity) | S.MmoShm1ORF2965P | |
| 2945 | DUF86 domain-containing protein | |||
| 2950 | DNA polymerase III subunit beta | |||
| 2955 | IS3 family transposase | |||
| 2960 | transposase | |||
| 2965 | M | M.MmoSPMXORF9225P (99% identity) | M.MmoShm1ORF2965P | |
| 2970 | R | Csp14ORF8935P (60% identity) | MmoShm1ORF2965P | |
| 2975 | DUF3240 domain-containing protein | |||
| 15945 | IS110 family transposase | |||
| 15950 | M | M.MmoSPMXORF660P (100% identity) | M.MmoShm1ORF15950P | |
| 15955 | virulence RhuM family protein | |||
| 15960 | anticodon nuclease | |||
| 15965 | S | S.CspPY97NORF325P (67% identity) | S1.MmoShm1ORF15950P | |
| 15970 | DNA damage-inducible protein D | |||
| 15975 | R | MmoSPMXORF660P (98% identity) | MmoShm1ORF15950P | |
| 15980 | AbrB/MazE/SpoVT family DNA-binding | |||
| 18780 | 130 aa hypothetical protein | |||
| 18785 | M | M.MmoSPMXORF6900P (52% identity) | M.MmoShm1ORF18785P | |
| 18790 | tetratricopeptide repeat protein | |||
| 19440 | 88 aa hypothetical protein | |||
| 19445 | R | MmoSPMXORF6340P (99% identity) | MmoShm1ORF19460P | |
| 19450 | S | S.MmoSPMXORF6340P (58% identity) | S.MmoShm1ORF19460P | |
| 19455 | 74 aa hypothetical protein | |||
| 19460 | M | M.MmoSPMXORF6340P (99% identity) | M.MmoShm1ORF19460P | |
| 19465 | restriction endonuclease | |||
| 19905 | WYL domain-containing protein | |||
| 19910 | M | M.MmoSPMXORF5920P (100% identity) | M.MmoShm1ORF19910P | |
| 19915 | UPF0175 family protein | |||
| 19920 | DUF3368 domain-containing protein | |||
| 19925 | S | S.TspCT3ORF20305P (76% identity) | S.MmoShm1ORF19910P | |
| 19930 | transcriptional regulator | |||
| 19935 | R | MspMP1ORF5690P (94% identity) | MmoShm1ORF19910P | |
| 19940 | type II toxin-antitoxin system VapC family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1360 | YnfA family protein | |||
| 1365 | M | M.MmoSPMXORF2730P (99% identity) | M.MmoShm1ORF1365P | |
| 1370 | carboxylating nicotinate-nucleotide | |||
| 10365 | 152 aa hypothetical protein | |||
| 10370 | M | M.NbaT11ORF19100P (35% identity) | M.MmoShm1ORF10370P | |
| 10375 | RusA family crossover junction | |||
| 12450 | 157 aa hypothetical protein | |||
| 12455 | R | SdeB26ORF1014P (74% identity) | MmoShm1ORF12460P | |
| 12460 | M | M.SspTTNORF965P (30% identity) | M.MmoShm1ORF12460P | |
| 12465 | transposase | |||
| 13580 | V | V.Smoaks1ORFCP (50% identity) | V.MmoShm1ORF13605P | |
| 13585 | 508 aa hypothetical protein | |||
| 13590 | IS5 family transposase | |||
| 13595 | 67 aa hypothetical protein | |||
| 13600 | histidine kinase | |||
| 13605 | M | M.Smoaks1ORFCP (63% identity) | M.MmoShm1ORF13605P | |
| 13610 | 105 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8600 | 124 aa hypothetical protein | |||
| 8605 | R | MpsM2ORF19480P (83% identity) | MmoShm1ORF8610P | |
| 8610 | M | M.XtrKm9ORF17060P (35% identity) | M.MmoShm1ORF8610P | |
| 8615 | 77 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19460 | N-6 DNA methylase | |||
| 19465 | R | MmoSPMXMrrP (100% identity) | MmoShm1MrrP | |
| 19470 | peroxiredoxin | |||