Escherichia coli CV261 |
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Putative Escherichia coli CV261 RM systems
Ref: Allue-Guardia,A. et al. unpublished
REBASE ref # 29284
| Sequence length: | GenBank #: | |
| Chromosome: | 5,449,111 bp | CP040316 |
| plasmid pO157: | 93,331 bp | CP040317 |
REBASE acronym: EcoCV261
Org_num: 36689
All begin FEL12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3430 | endoribonuclease SymE | |||
| 3435 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoCV261ORF3440P |
| 3440 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoCV261ORF3440P |
| 3445 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoCV261ORF3440P |
| 3450 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoCV261ORF1865P | |
| 1875 | Eae protein | |||
| 3075 | DUF4102 domain-containing protein | |||
| 3080 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoCV261ORF3090P |
| 3085 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoCV261ORF3090P |
| 3090 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoCV261ORF3090P |
| 3095 | 87 aa hypothetical protein | |||
| 3165 | transposase | |||
| 3170 | R | Ecos1613ORF26795P (100% identity) | EcoCV261ORF3170P | |
| 3175 | N-acetylneuraminate epimerase | |||
| 3205 | DEAD/DEAH box helicase | |||
| 3210 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoCV261ORF3210P |
| 5185 | PerC family transcriptional regulator | |||
| 5190 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoCV261ORF5190P |
| 5195 | LexA family transcriptional regulator | |||
| 12875 | TrmB family transcriptional regulator | |||
| 12880 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoCV261ORF12880P | |
| 12895 | 61 aa hypothetical protein | |||
| 14965 | DUF1737 domain-containing protein | |||
| 14970 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoCV261ORF14970P | |
| 14975 | TrmB family transcriptional regulator | |||
| 17215 | drug/metabolite exporter YedA | |||
| 17220 | V | V.EcosPA8DcmP (100% identity) | V.EcoCV261DcmP | |
| 17225 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCV261DcmP |
| 17230 | phosphohydrolase | |||
| 24740 | DNA-binding transcriptional regulator Fis | |||
| 24745 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoCV261ORF24745P |
| 24750 | DUF2556 domain-containing protein | |||
| 25275 | ribulose-phosphate 3-epimerase | |||
| 25280 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCV261DamP |
| 25285 | cell division protein DamX | |||
| plasmid pO157 | ||||
| 27980 | 101 aa hypothetical protein | |||
| 27985 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoCV261ORF27985P | |
| 27990 | 73 aa hypothetical protein | |||