Escherichia coli 21B8 |
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Putative Escherichia coli 21B8 RM systems
Ref: Allue-Guardia,A. et al. unpublished
REBASE ref # 29284
| Sequence length: | GenBank #: | |
| Chromosome: | 5,401,709 bp | CP040309 |
| plasmid pO157: | 93,175 bp | CP040310 |
REBASE acronym: Eco21B8
Org_num: 36625
All begin FEK99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3240 | endoribonuclease SymE | |||
| 3245 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco21B8ORF3250P |
| 3250 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco21B8ORF3250P |
| 3255 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco21B8ORF3250P |
| 3260 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1670 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco21B8ORF1675P | |
| 1685 | Eae protein | |||
| 2885 | DUF4102 domain-containing protein | |||
| 2890 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco21B8ORF2900P |
| 2895 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco21B8ORF2900P |
| 2900 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco21B8ORF2900P |
| 2905 | 87 aa hypothetical protein | |||
| 2975 | transposase | |||
| 2980 | R | Ecos1613ORF26795P (100% identity) | Eco21B8ORF2980P | |
| 2985 | N-acetylneuraminate epimerase | |||
| 3015 | DEAD/DEAH box helicase | |||
| 3020 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco21B8ORF3020P |
| 4955 | PerC family transcriptional regulator | |||
| 4960 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco21B8ORF4960P |
| 4965 | LexA family transcriptional regulator | |||
| 12325 | TrmB family transcriptional regulator | |||
| 12330 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco21B8ORF12330P | |
| 12345 | 61 aa hypothetical protein | |||
| 14375 | DUF1737 domain-containing protein | |||
| 14380 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco21B8ORF14380P | |
| 14385 | TrmB family transcriptional regulator | |||
| 17050 | drug/metabolite exporter YedA | |||
| 17055 | V | V.EcosPA8DcmP (100% identity) | V.Eco21B8DcmP | |
| 17060 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco21B8DcmP |
| 17065 | phosphohydrolase | |||
| 24450 | DNA-binding transcriptional regulator Fis | |||
| 24455 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco21B8ORF24455P |
| 24460 | DUF2556 domain-containing protein | |||
| 24985 | ribulose-phosphate 3-epimerase | |||
| 24990 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco21B8DamP |
| 24995 | cell division protein DamX | |||
| plasmid pO157 | ||||
| 27650 | 101 aa hypothetical protein | |||
| 27655 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco21B8ORF27655P | |
| 27660 | 73 aa hypothetical protein | |||