Ref: Doyle,S. unpublished

REBASE ref # 28948

Contig set: 2,220,331 bp

GenBank #: UGQZ00000000 (NZ_UGQZ00000000)

REBASE acronym: Ngo13801

Org_num: 35532

 

All begin NCTC13801_

Type I
ORF Gene Most similar Specificity Name
 
400 ADP-L-glycero-D-manno-heptose-6-epimerase
401 M M.NgoWSII (100% identity) GCANNNNNNNGTC M.Ngo13801III
402 DNA-damage-inducible protein D
403 S S.NgoNG290ORF2325P (100% identity) GCANNNNNNNGTC S.Ngo13801III
404 R Ngos1291ORF7750P (100% identity) GCANNNNNNNGTC Ngo13801IIIP
405 ATP-dependent protease ATP-binding protein
 
939 bifunctional 3,4-dihydroxy-2-butanone
940 M M.Ngos1291ORF9245P (100% identity) GAGNNNNNTAC M.Ngo13801I
941 Uncharacterised protein
942 Uncharacterised protein
943 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo13801I
944 DNA-binding protein
??? R NgoWLIP (100% identity) GAGNNNNNTAC Ngo13801IP
947 recombination factor protein RarA
Type II
ORF Gene Most similar Specificity Name
 
6 leucyl-tRNA synthetase
7 R type II restriction endonuclease GATC Ngo13801ORF7P
8 modification methylase DpnIIB
 
7 type II restriction endonuclease
8 M M.NgoWSORF8P (100% identity) M.Ngo13801ORF8P
9 Uncharacterised protein
 
294 phenylalanyl-tRNA synthetase subunit alpha
295 V NmeDIP very-short-patch-repair endonuclease V.Ngo13801ORF296P
??? M M.NgoWSORF391P (100% identity) CCGG M.Ngo13801ORF296P
298 R Uncharacterised protein Ngo13801ORF296P
299 phenylalanyl-tRNA synthetase subunit beta
 
352 Transposase and inactivated derivatives
353 RM NgoWOORF381P (100% identity) GACNNNNNTGA Ngo13801ORF353P
354 S Restriction enzyme BgcI subunit beta GACNNNNNTGA S.Ngo13801ORF353P
355 secreted protein
 
359 uroporphyrinogen decarboxylase
360 H stress-sensitive restriction system protein H.Ngo13801ORF362P
361 R restriction endonuclease R.NgoVII GCSGC Ngo13801ORF362P
362 M site-specific DNA-methyltransferase M.NgoVII GCSGC M.Ngo13801ORF362P
363 Uncharacterised protein
 
712 phosphoribosylaminoimidazole carboxylase ATPase
713 R NgoWSORF1056P (100% identity) GCCGGC Ngo13801ORF714P
714 M DNA modification methylase M.NGOI GCCGGC M.Ngo13801ORF714P
715 anthranilate synthase component I
 
969 3-isopropylmalate dehydratase small
970 M DNA modification methylase (N.MgoV) GGNNCC M.Ngo13801ORF970P
971 R Ngos1291ORF9120P (100% identity) GGNNCC Ngo13801ORF970P
972 3-isopropylmalate dehydrogenase
 
1195 phage replication initiation protein
1196 V DNA mismatch endonuclease, patch repair protein V.Ngo13801ORF1199P
1197 Protein of uncharacterised function
1198 HSP90 family protein
??? M DNA cytosine methyltransferase M.Ngo13801ORF1199P
1200 Uncharacterised protein
 
1236 excinuclease ABC subunit A
1237 R NgoMIIIM CCGCGG Ngo13801ORF1238P
1238 M DNA cytosine methyltransferase CCGCGG M.Ngo13801ORF1238P
1239 type I restriction-modification system
 
1885 integral membrane protein
1886 R NgoWOORF1958P (100% identity) GGCC Ngo13801ORF1887P
1887 M DcmB GGCC M.Ngo13801ORF1887P
1888 ribosome recycling factor
 
1986 protein DamH
1987 M M2.Ngos1291ORF4080P (100% identity) GGTGA M2.Ngo13801ORF1986P
1988 transcriptional accessory protein Tex
 
1984 glutamate permease
1985 R restriction endonuclease GGTGA Ngo13801IIP
1986 M M1.NgoJH17ORFQP (100% identity) GGTGA M1.Ngo13801II
1987 5-methylcytosine methyltransferase
 
2090 GTPase ObgE
2091 M NgoIM RGCGCY M.Ngo13801ORF2091P
2092 R NgoI restriction endonuclease RGCGCY Ngo13801ORF2091P
2093 protein CysS
Type III
ORF Gene Most similar Specificity Name
 
1002 tRNA pseudouridine synthase B
??? M M.NgoWMORF1085P (100% identity) M.Ngo13801ORF1003P
1005 R NgoJH8ORFHP (100% identity) Ngo13801ORF1003P
1006 L-lactate dehydrogenase
 
1097 C32 tRNA thiolase
1098 R NgoWSORF647P (100% identity) CCACC Ngo13801ORF1099P
1099 M type III restriction-modification system CCACC M.Ngo13801ORF1099P
1100 peptidyl-prolyl cis-trans isomerase A