Ref: Doyle,S. unpublished

REBASE ref # 28948

Contig set: 2,205,498 bp

GenBank #: UGQX00000000 (NZ_UGQX00000000)

REBASE acronym: Ngo13795

Org_num: 35531

 

All begin NCTC13795_

Type I
ORF Gene Most similar Specificity Name
 
526 ADP-L-glycero-D-manno-heptose-6-epimerase
??? M type I restriction-modification system methyltransferase M.Ngo13795ORF527P
529 DNA-damage-inducible protein D
530 S S.NgoTFGB2ORFAP (100% identity) S.Ngo13795ORF527P
531 R NgoWSIIP (100% identity) Ngo13795ORF527P
532 ATP-dependent protease ATP-binding protein
 
1006 bifunctional 3,4-dihydroxy-2-butanone
1007 M M.NgoWSI (100% identity) GAGNNNNNTAC M.Ngo13795I
1008 Uncharacterised protein
1009 Uncharacterised protein
1010 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo13795I
1011 DNA-binding protein
??? R NgoTFGB2ORF708P (100% identity) GAGNNNNNTAC Ngo13795IP
1014 recombination factor protein RarA
Type II
ORF Gene Most similar Specificity Name
 
126 leucyl-tRNA synthetase
127 R type II restriction endonuclease GATC Ngo13795ORF127P
??? M M.NgoWPORF8P (100% identity) M.Ngo13795ORF127P
129 Uncharacterised protein
 
420 phenylalanyl-tRNA synthetase subunit alpha
421 V NmeDIP very-short-patch-repair endonuclease V.Ngo13795ORF422P
??? M M.NgoWSORF391P (100% identity) M.Ngo13795ORF422P
424 R Uncharacterised protein Ngo13795ORF422P
425 phenylalanyl-tRNA synthetase subunit beta
 
478 Transposase and inactivated derivatives
479 RM Restriction enzyme BgcI subunit alpha GACNNNNNTGA Ngo13795ORF479P
480 S Restriction enzyme BgcI subunit beta GACNNNNNTGA S.Ngo13795ORF479P
481 secreted protein
 
485 uroporphyrinogen decarboxylase
486 H stress-sensitive restriction system protein H.Ngo13795ORF488P
487 R restriction endonuclease R.NgoVII GCSGC Ngo13795ORF488P
488 M site-specific DNA-methyltransferase M.NgoVII GCSGC M.Ngo13795ORF488P
489 Uncharacterised protein
 
841 phosphoribosylaminoimidazole carboxylase ATPase
842 R NgoWSORF1056P (100% identity) GCCGGC Ngo13795ORF843P
843 M DNA modification methylase M.NGOI GCCGGC M.Ngo13795ORF843P
844 anthranilate synthase component I
 
1037 3-isopropylmalate dehydratase small
1038 M DNA modification methylase (N.MgoV) GGNNCC M.Ngo13795ORF1038P
1039 R NgoWSORF784P (100% identity) GGNNCC Ngo13795ORF1038P
1040 3-isopropylmalate dehydrogenase
 
1263 phage replication initiation protein
1264 V DNA mismatch endonuclease, patch repair protein V.Ngo13795ORF1267P
1265 Protein of uncharacterised function
1266 HSP90 family protein
1267 M cytosine-specific methyltransferase M.Ngo13795ORF1267P
1268 Uncharacterised protein
 
1304 excinuclease ABC subunit A
1305 R NgoMIIIM CCGCGG Ngo13795ORF1306P
1306 M DNA cytosine methyltransferase CCGCGG M.Ngo13795ORF1306P
1307 type I restriction-modification system
 
1953 integral membrane protein
1954 R NgoWOORF1958P (100% identity) GGCC Ngo13795ORF1955P
1955 M DcmB GGCC M.Ngo13795ORF1955P
1956 ribosome recycling factor
 
2053 protein DamH
2054 M M2.Ngos1291ORF4080P (100% identity) GGTGA M2.Ngo13795ORF2053P
2055 transcriptional accessory protein Tex
 
2051 glutamate permease
2052 R restriction endonuclease GGTGA Ngo13795IIP
2053 M protein DamH GGTGA M1.Ngo13795II
2054 5-methylcytosine methyltransferase
 
2159 GTPase ObgE
2160 M NgoIM RGCGCY M.Ngo13795ORF2160P
2161 R NgoI restriction endonuclease RGCGCY Ngo13795ORF2160P
2162 protein CysS
Type III
ORF Gene Most similar Specificity Name
 
1070 tRNA pseudouridine synthase B
??? M M.Ngo205ORF10520P (98% identity) M.Ngo13795ORF1071P
1073 R NgoTFGB2ORF644P (100% identity) Ngo13795ORF1071P
1074 L-lactate dehydrogenase
 
1167 C32 tRNA thiolase
1168 R NgoWSORF647P (100% identity) CCACC Ngo13795ORF1169P
1169 M type III restriction-modification system CCACC M.Ngo13795ORF1169P
1170 peptidyl-prolyl cis-trans isomerase A