Ref: Doyle,S. unpublished

REBASE ref # 28948

Contig set: 2,329,638 bp

GenBank #: UGRK00000000 (NZ_UGRK00000000)

REBASE acronym: Ngo10931

Org_num: 35529

 

All begin NCTC10931_

Type I
ORF Gene Most similar Specificity Name
 
359 bifunctional 3,4-dihydroxy-2-butanone
360 M M.NgoPID1ORF461P (99% identity) GAGNNNNNTAC M.Ngo10931I
361 Uncharacterised protein
362 Uncharacterised protein
363 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo10931I
364 DNA-binding protein
??? R NgoFQ35ORF5510P (99% identity) GAGNNNNNTAC Ngo10931IP
367 recombination factor protein RarA
 
2117 ADP-L-glycero-D-manno-heptose-6-epimerase
2118 M M.Ngos1291ORF7750P (100% identity) GCANNNNNNGTC M.Ngo10931IV
2119 DNA-damage-inducible protein D
2120 S S.NgoWMII (99% identity) GCANNNNNNGTC S.Ngo10931IV
2121 R Ngo19853ORF11850P (99% identity) GCANNNNNNGTC Ngo10931IVP
2122 ATP-dependent protease ATP-binding protein
Type II
ORF Gene Most similar Specificity Name
 
133 phosphoribosylaminoimidazole carboxylase ATPase
134 R NgoWSORF1056P (100% identity) GCCGGC Ngo10931ORF135P
135 M M.NgoWLORF1156P (100% identity) GCCGGC M.Ngo10931ORF135P
136 anthranilate synthase component I
 
388 3-isopropylmalate dehydratase small
389 M DNA modification methylase (N.MgoV) GGNNCC M.Ngo10931ORF389P
390 R NgoWSORF784P (100% identity) GGNNCC Ngo10931ORF389P
391 3-isopropylmalate dehydrogenase
 
972 phage replication initiation protein
973 V DNA mismatch endonuclease, patch repair protein V.Ngo10931ORF976P
974 Protein of uncharacterised function
975 HSP90 family protein
??? M M.Ngos1291ORF65P (97% identity) M.Ngo10931ORF976P
977 Uncharacterised protein
 
1014 excinuclease ABC subunit A
1015 R NgoMIIIM CCGCGG Ngo10931ORF1016P
1016 M DNA cytosine methyltransferase CCGCGG M.Ngo10931ORF1016P
1017 type I restriction-modification system
 
1306 protein CysS
1307 R NgoI restriction endonuclease RGCGCY Ngo10931ORF1308P
1308 M M.NgoWFORF2310P (100% identity) RGCGCY M.Ngo10931ORF1308P
1309 GTPase ObgE
 
1424 transcriptional accessory protein Tex
1425 M 5-methylcytosine methyltransferase GGTGA M1.Ngo10931IIP
1426 M M1.NgoFQ35ORF11380P (100% identity) GGTGA M2.Ngo10931II
1427 R restriction endonuclease GGTGA Ngo10931IIP
1428 Uncharacterised protein
 
1535 ribosome recycling factor
1536 M DcmB GGCC M.Ngo10931ORF1536P
1537 R NgoPII restriction and modification GGCC Ngo10931ORF1536P
1538 NgoPII restriction and modification
 
1702 leucyl-tRNA synthetase
1703 M type II DNA modification methylase M1.Ngo10931ORF1703P
??? M hypothetical protein M2.Ngo10931ORF1703P
1705 Uncharacterised protein
 
2010 phenylalanyl-tRNA synthetase subunit alpha
2011 V NmeDIP very-short-patch-repair endonuclease V.Ngo10931ORF2012P
??? M hypothetical protein M.Ngo10931ORF2012P
2014 R Uncharacterised protein Ngo10931ORF2012P
2015 phenylalanyl-tRNA synthetase subunit beta
 
2068 Transposase and inactivated derivatives
2069 RM Restriction enzyme BgcI subunit alpha GACNNNNNTGA Ngo10931ORF2069P
2070 S Restriction enzyme BgcI subunit beta GACNNNNNTGA S.Ngo10931ORF2069P
2071 secreted protein
 
2075 uroporphyrinogen decarboxylase
2076 H stress-sensitive restriction system protein H.Ngo10931ORF2079P
2077 stress-sensitive restriction system protein
2078 R restriction endonuclease R.NgoVII GCSGC Ngo10931ORF2079P
2079 M site-specific DNA-methyltransferase M.NgoVII GCSGC M.Ngo10931ORF2079P
2080 Uncharacterised protein
Type III
ORF Gene Most similar Specificity Name
 
421 tRNA pseudouridine synthase B
??? M M.NgoJH17ORFJP (98% identity) M.Ngo10931ORF422P
424 R NgoWFORF680P (99% identity) Ngo10931ORF422P
425 L-lactate dehydrogenase
 
517 C32 tRNA thiolase
518 R type III restriction-modification system CCACC Ngo10931VP
519 M type III restriction-modification system CCACC M.Ngo10931V
520 peptidyl-prolyl cis-trans isomerase A