Salmonella enterica subsp. enterica serovar Schwarzengrund 12888 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Schwarzengrund 12888 RM systems
Ref: Galetti,R. et al. unpublished
REBASE ref # 29038
| Sequence length: | GenBank #: | |
| Chromosome: | 4,630,202 bp | CP045447 |
| plasmid p280_12888: | 276,739 bp | CP045449 |
REBASE acronym: Sen12888
Org_num: 35715
All begin GEO46_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen12888DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 domain-containing protein | |||
| 2245 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen12888ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 8710 | phosphohydrolase | |||
| 8715 | M | M.Ssp918DcmP (100% identity) | CCWGG | M.Sen12888DcmP |
| 8720 | V | DNA mismatch endonuclease Vsr | V.Sen12888DcmP | |
| 8725 | drug/metabolite exporter YedA | |||
| 9440 | antitermination protein | |||
| 9445 | M | M.Sen9355ORF9440P (100% identity) | M.Sen12888ORF9445P | |
| 9450 | AAA family ATPase | |||
| 15085 | NinE family protein | |||
| 15090 | M | M.Ssp918ORF14675P (100% identity) | GATC | M.Sen12888ORF15090P |
| 15095 | recombination protein NinB | |||
| 15200 | ead/Ea22-like family protein | |||
| 15205 | M | M.Sen9355ORF15210P (100% identity) | M.Sen12888ORF15205P | |
| 15210 | 136 aa hypothetical protein | |||
| 19540 | DeoR family transcriptional regulator | |||
| 19545 | R | Ssp918ORF19230P (99% identity) | Sen12888ORF19550P | |
| 19550 | M | M.Ssp918ORF19230P (100% identity) | M.Sen12888ORF19550P | |
| 19555 | DNA helicase | |||
| plasmid p280_12888 | ||||
| 23340 | DUF1173 family protein | |||
| 23345 | M | M.YpsF1ORFCP (100% identity) | M.Sen12888ORF23345P | |
| 23350 | nuclease | |||
| 23980 | 108 aa hypothetical protein | |||
| 23985 | M | M.YpsF1ORFBP (100% identity) | M.Sen12888ORF23985P | |
| 23990 | 202 aa hypothetical protein | |||
| 24090 | DNA-binding protein | |||
| 24095 | M | M.YpsF1ORFDP (100% identity) | M.Sen12888ORF24095P | |
| 24100 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17185 | 33 aa hypothetical protein | |||
| 17190 | R | Sens679ORF16435P (100% identity) | CAGAG | Sen12888ORF17195P |
| 17195 | M | M.Sens679ORF16435P (100% identity) | CAGAG | M.Sen12888ORF17195P |
| 17200 | MFS transporter | |||