Escherichia coli 04-00955 |
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Putative Escherichia coli 04-00955 RM systems
Ref: Gati,N.S. et al. unpublished
REBASE ref # 29126
Complete sequence: 5,349,824 bp
GenBank #: CP035498
REBASE acronym: Eco955
Org_num: 36103
All begin EQO00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22590 | restriction endonuclease | |||
| 22595 | M | M.EcosA4II (100% identity) | M.Eco955ORF22595P | |
| 22600 | S | S.EcosA4II (100% identity) | S.Eco955ORF22595P | |
| 22605 | R | EcoSCB11ORF13455P (100% identity) | Eco955ORF22595P | |
| 22610 | endoribonuclease SymE | |||
| 22870 | DUF4942 domain-containing protein | |||
| 22875 | M | M.EcosA4I (100% identity) | M.Eco955ORF22875P | |
| 22880 | S | S.EcosA4I (100% identity) | S.Eco955ORF22875P | |
| 22885 | R | EcosA33IP (100% identity) | Eco955ORF22875P | |
| 22895 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | cell division protein DamX | |||
| 1820 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco955DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2430 | DUF2556 domain-containing protein | |||
| 2435 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco955ORF2435P |
| 2440 | DNA-binding transcriptional regulator Fis | |||
| 7075 | DUF1382 family protein | |||
| 7080 | M | M.EcoPYO2ORF17175P (100% identity) | M.Eco955ORF7080P | |
| 7085 | PerC family transcriptional regulator | |||
| 8690 | DUF4087 domain-containing protein | |||
| 8695 | RM | Eco3325ORF28315P (100% identity) | Eco955ORF8695P | |
| 8700 | S | S.Eco2018166ORF25660P (96% identity) | S1.Eco955ORF8695P | |
| 8705 | S | S.Eco3325ORF28315P (45% identity) | S2.Eco955ORF8695P | |
| 8710 | antitermination protein | |||
| 10730 | phosphohydrolase | |||
| 10735 | M | M.EcosA33DcmP (100% identity) | CCWGG | M.Eco955DcmP |
| 10740 | V | V.EcosA4DcmP (100% identity) | V.Eco955DcmP | |
| 10745 | drug/metabolite exporter YedA | |||
| 16085 | DUF1737 domain-containing protein | |||
| 16105 | M | M.Eco927ORF7915P (98% identity) | M.Eco955ORF16105P | |
| 16110 | TrmB family transcriptional regulator | |||
| 16735 | holin | |||
| 16740 | M | M.Eco3033ORFBP (100% identity) | M.Eco955ORF16740P | |
| 16745 | M15 family peptidase | |||
| 19065 | LexA family transcriptional regulator | |||
| 19070 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco955ORF19070P |
| 19075 | PerC family transcriptional regulator | |||
| 22345 | RusA family crossover junction | |||
| 22350 | M | M.EcoSCB11ORF17850P (100% identity) | GATC | M.Eco955ORF22350P |
| 22355 | PerC family transcriptional regulator | |||
| 22850 | HNH endonuclease | |||
| 22855 | R | EcosA4ORF22115P (100% identity) | Eco955ORF22855P | |
| 22860 | restriction endonuclease | |||
| 23880 | ATP-binding protein | |||
| 23885 | M | M.EcosS3ORF15775P (100% identity) | M.Eco955ORF23885P | |
| 23890 | 81 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22855 | HNH endonuclease | |||
| 22860 | R | EcoSCB11McrCP (100% identity) | Eco955McrCP | |
| 22865 | R | EcosA4McrBP (100% identity) | Eco955McrBP | |
| 22870 | DUF4942 domain-containing protein | |||