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Putative Citrobacter species NMI7904_11 RM systems
Ref: Goncalves Ribeiro,T. et al. unpublished
REBASE ref # 29453
Sequence length: | GenBank #: | |
Chromosome: | 5,445,431 bp | CP045205 |
plasmid pCTEL-1: | 113,742 bp | CP045204 |
plasmid pCTEL-2: | 235,057 bp | CP045203 |
REBASE acronym: Csp411
Org_num: 37155
All begin GBC03_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
7930 | DUF4263 domain-containing protein | |||
7935 | R | Eta9ORF3750P (98% identity) | Csp411ORF7955P | |
7940 | FRG domain-containing protein | |||
7945 | S | S.EasWA007ORF20020P (95% identity) | S.Csp411ORF7955P | |
7950 | IS630-like element ISEc33 family transposase | |||
7955 | M | M.EasWA007ORF20020P (97% identity) | M.Csp411ORF7955P | |
7960 | TIR domain-containing protein | |||
12180 | 402 aa hypothetical protein | |||
12185 | R | EcoW12E19ORF23680P (100% identity) | Csp411ORF12190P | |
12190 | M | M.EcoW12E19ORF23680P (100% identity) | M.Csp411ORF12190P | |
12195 | S | S.EcoW12E19ORF23680P (100% identity) | S1.Csp411ORF12190P | |
12200 | IS5-like element ISKpn26 family transposase | |||
12205 | glycosyltransferase | |||
12210 | glycosyltransferase | |||
12215 | sulfatase-like hydrolase/transferase | |||
12220 | bifunctional phosphoribosyl-AMP | |||
12225 | imidazole glycerol phosphate synthase subunit | |||
12230 | S | S.Cfr181ORF24140P (34% identity) | S2.Csp411ORF12190P | |
12235 | IS1 family transposase | |||
12240 | S | S.Cfr181ORF24140P (21% identity) | S3.Csp411ORF12190P | |
12245 | nuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2560 | ribulose-phosphate 3-epimerase | |||
2565 | M | M.CamY19DamP (98% identity) | GATC | M.Csp411DamP |
2570 | cell division protein DamX | |||
5535 | 70 aa hypothetical protein | |||
5540 | M | M.SenK61ORFCP (99% identity) | M.Csp411ORF5540P | |
5545 | 59 aa hypothetical protein | |||
10425 | TraR/DksA family transcriptional regulator | |||
10430 | M | M.Cfr691ORFMP (87% identity) | M.Csp411ORF10430P | |
10435 | replication endonuclease | |||
10985 | 85 aa hypothetical protein | |||
10990 | M | M.Csp86ORF1751P (99% identity) | M.Csp411ORF10990P | |
10995 | DinI-like family protein | |||
11025 | structural protein | |||
11030 | M | M.Cam165ORF9120P (100% identity) | M.Csp411ORF11030P | |
11035 | 93 aa hypothetical protein | |||
12300 | TraR/DksA family transcriptional regulator | |||
12305 | M | M.EclC1431ORF24700P (98% identity) | M.Csp411ORF12305P | |
12310 | 71 aa hypothetical protein | |||
14475 | transposase | |||
14480 | M | M.Ssp60ORF16560P (100% identity) | M.Csp411ORF14480P | |
14485 | 925 aa hypothetical protein | |||
14665 | HTH-type transcriptional regulator Cbl | |||
14670 | M | M.PcaDPMP6ORF17410P (100% identity) | M.Csp411ORF14670P | |
14675 | ATP-binding protein | |||
14870 | phosphohydrolase | |||
14875 | M | M.CamY19DcmP (96% identity) | CCWGG | M.Csp411DcmP |
14880 | V | V.CamY19DcmP (95% identity) | V.Csp411DcmP | |
14885 | drug/metabolite exporter YedA | |||
17475 | IS3 family transposase | |||
17480 | M | M.YpsF1ORFCP (100% identity) | M.Csp411ORF17480P | |
17485 | nuclease | |||
27335 | IS66 family transposase | |||
27340 | RM | Sma1978ORFHP (99% identity) | CTTGAC | Csp411ORF27340P |
27345 | DEAD/DEAH box helicase | |||
28525 | DNA-binding transcriptional regulator Fis | |||
28530 | M | M.CamY19ORF17925P (95% identity) | ATGCAT | M.Csp411ORF28530P |
28535 | DUF2556 domain-containing protein | |||
plasmid pCTEL-1 | ||||
1875 | 64 aa hypothetical protein | |||
1880 | M | M.Eko2020ORF26220P (100% identity) | M.Csp411ORF1880P | |
1885 | 73 aa hypothetical protein | |||
plasmid pCTEL-2 | ||||
1350 | DNA polymerase III subunit beta | |||
1355 | M | M.Sen3039ORF24445P (100% identity) | M.Csp411ORF1355P | |
1360 | 76 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
27515 | Cd(II)/Pb(II)-responsive transcriptional | |||
27520 | M | M.Sen5006ORF16245P (100% identity) | M.Csp411ORF27520P | |
27525 | R | SenLASSORF19350P (100% identity) | Csp411ORF27520P | |
27530 | inovirus Gp2 family protein |