Lactobacillus harbinensis M1 |
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Putative Lactobacillus harbinensis M1 RM systems
Ref: Zheng,Y. unpublished
REBASE ref # 29813
Complete sequence: 3,592,195 bp
GenBank #: CP045143
REBASE acronym: LhaM1
Org_num: 38144
All begin D1010_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9485 | 263 aa hypothetical protein | |||
| 9490 | R | CinURNWORF2828P (73% identity) | LhaM1ORF9490P | |
| 9495 | 177 aa hypothetical protein | |||
| ??? | S | S.Aco12261I (11% identity) | S.LhaM1ORF9490P | |
| 9500 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3065 | IS30 family transposase | |||
| 3070 | M | M.LpaLp02ORF7015P (41% identity) | M.LhaM1ORF3070BP | |
| 3075 | IS110 family transposase | |||
| 3080 | M | M.LpaLp02ORF7015P (36% identity) | M.LhaM1ORF3070AP | |
| 3085 | IS110 family transposase | |||
| 5795 | 112 aa hypothetical protein | |||
| 5800 | M | M.LhaJ42ORF2030P (100% identity) | M.LhaM1ORF5800P | |
| 5805 | ISL3 family transposase | |||
| 15300 | DUF2090 domain-containing protein | |||
| 15305 | RM | Lrh2166ORF6730P (64% identity) | LhaM1ORF15305P | |
| 15310 | aldo/keto reductase | |||
| 17260 | BREX-1 system phosphatase PglZ type A | |||
| 17265 | RM | Lpl3426ORF16680P (71% identity) | LhaM1ORF17265P | |
| 17270 | tyrosine-type recombinase/integrase | |||
| 17270 | tyrosine-type recombinase/integrase | |||
| 17275 | RM | LfeF6ORF387P (84% identity) | LhaM1ORF17275P | |
| 17280 | BREX system P-loop protein BrxC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9800 | 96 aa hypothetical protein | |||
| 9805 | R | Lac726ORF3350P (58% identity) | LhaM1ORF9805P | |
| 9810 | NUDIX domain-containing protein | |||